| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2979 |
|---|
| Symbol | |
|---|
| ID | 4310566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 3286654 |
|---|
| End bp | 3287910 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638150819 |
|---|
| Product | dienelactone hydrolase and related enzyme-like protein |
|---|
| Protein accession | YP_774869 |
|---|
| Protein GI | 115353030 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCA GCAAAGTATT GGTGGGATGG ATGGCGGCCT GTGCGCTGTC GGCCGCTCAG
GCCGGTGCGC TGCCGAACGC AAATACCGGC GCGGCCGCAG CCGCCGGCTC GCTCGCCCAT
GCCGAGCGCT TCGATTACGG CGATTCGCGC CTCCCGCAAG TTGCCGCGAA CCTCAACGAA
CAAGTCATCA GCATTCCGGC CGATGCGTCG GGCACCGTGA TGCTCGAGGC CACGCTGTTC
AAGCCGGACG GCCCCGGCCC GTTCCCGCTC GTCGTCTTCA ACCACGGCAA GAACACCGGC
GATCTGCATC TGCAGCCGCG CAGCCGGCCG CTCGCGTTCG CCCGTGAATT CGTGCGCCGC
GGCTATGCGG TGATCGCGCC GAACCGCCAA GGCTTCGCCG GGTCGGGCGG CACGTACCAG
CAGGAAGGCT GCAACGTCCG CAAGAACGGC CTCGCGCAGG CCGCCGACGT CGCCGCGACG
GTCCGCTACA TGTCGCGTCA GTCGTACATC GATGCGTCGC GCATCGTCGT CGCCGGCACG
TCGCATGGCG GCCTCGCGTC GGTCGCGTAC GGCACCGAAG CGGCGCCCGG CGTGCGCGGC
ATCATCAACT TCTCCGGCGG GCTGCGCCAG GATCTCTGCG ACGGCTGGCA GCGCAATCTC
GTCGAAGCAT TCGACCAGTA CGGCGCGCAT ACGGCCGTGC GCTCGCTGTG GCTGTACGGC
GACAACGATT CGGTGTGGAC GCCCGCGCTC GTCGCGCAGA TGCACGACGC GTACGTGTCG
CACGGCACGC AGGCGCAGTT CATCGATTTC GGCCGCTACA AGGACGACGC GCACCGGCTG
ATCGTCGATC GCGACGGCGT GCCCGTGTGG TGGCCGGCCG TGCATGCGTT CCTCGCGGAC
CTGAGCCTGC CGACCTCGGT GCGCTATGCG GTCGCGAACC CGCACGAGCC GAATGCGACC
GGCTACGCGT CGATCGATGC GGTCGAGGCG GTGCCGTTCC TCGACGCGGC CGGCCGCGAA
GGCTATCGCC GCTTCCTGAG CCAGCATCCG AGCCGCGCGT TCGCGGTGTC CGCCGAAGGC
GCGTGGTCGT GGGCCGAAGG CGGCGACGAC CCGATGGCGC TCGCGCTCGA CAACTGCACG
AAGCAGGGTG CGGGTGCGTG CCGGCTGTAT GCGGTGAACG ACCGCGTCGT GTGGAACGGC
GCGACGCAGA CGGCCGACAA CGGCGACGCC GATACGCACG CGCTGGCTTC GCGCTGA
|
|---|
| Protein sequence | MAFSKVLVGW MAACALSAAQ AGALPNANTG AAAAAGSLAH AERFDYGDSR LPQVAANLNE
QVISIPADAS GTVMLEATLF KPDGPGPFPL VVFNHGKNTG DLHLQPRSRP LAFAREFVRR
GYAVIAPNRQ GFAGSGGTYQ QEGCNVRKNG LAQAADVAAT VRYMSRQSYI DASRIVVAGT
SHGGLASVAY GTEAAPGVRG IINFSGGLRQ DLCDGWQRNL VEAFDQYGAH TAVRSLWLYG
DNDSVWTPAL VAQMHDAYVS HGTQAQFIDF GRYKDDAHRL IVDRDGVPVW WPAVHAFLAD
LSLPTSVRYA VANPHEPNAT GYASIDAVEA VPFLDAAGRE GYRRFLSQHP SRAFAVSAEG
AWSWAEGGDD PMALALDNCT KQGAGACRLY AVNDRVVWNG ATQTADNGDA DTHALASR
|
|---|
| |