Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2972 |
Symbol | |
ID | 4310559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3277381 |
End bp | 3278976 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638150812 |
Product | extracellular solute-binding protein |
Protein accession | YP_774862 |
Protein GI | 115353023 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCCA AGCTGTTCAC CGCGGCCGCG CTCGCCGCCG CCCTCGCCGC TCCCGGCCTC GCCGTCGCCA AGCCGCTCAC CGTCTGCACG GAATCGAGCC CGGACGGCTT CGACGTCGTG CAGTACAACT CACTCGTCAC CACCAATGCG TCGGCCGACG TGATCTTCAA CACGCTCGTG TCGTACGACG AAGCCGCGAA GAAGGTCGTG CCGGCGCTCG CCGACAAATG GGAAGCCAGC GCCGACGGTC TCACGTACAC GTTCCACCTG CGGCCGAACG TCGCGTTCCA GACGACCGAC TACTTCAAGC CGGGCCGCCC GCTGAACGCG GACGACGTCG TGTTCACGTT CTCGCGGATG CTCGACGACG CGAACCCGTG GCACAAGGTG GCCGGCGCGA GCGGCTTTCC GCACGCGCAG TCGATGGGCC TCGTGAAGCT CGTGAAGTCG GTCACGAAGG TCGACGACAG CACGGTGAAG TTCGTGCTGA ACGAGCCGAA CGCGACGTTC GTGTCGATCC TGACGATGGG CTTCGCGTCG ATCTACTCGG CCGAATACGC GGACCAGCTG CTGAAGGCCG GCAAGCAGGC CGATCTAAAC GCGAAGCCGG TCGGCACCGG CCCGTTCGTG CTGAAGAGCT ACACGAAGGA CGCGCTGATC CGCTACGACG TGAACCCGAC CTACTGGGGC ACGAAGCCGA AGGTCGACCG GCTGATCTAC GCGATCACGC CGGACGCGTC CGTGCGCATG CAGAAGGTGA AGGCCGGCGA ATGCCAGATC GCGCTGTCGC CGAAGCCGCA GGACGTGCTC GCCGCGAAGG GCGAAAGCGC GCTGAAGGTC GTGCAGACGC CCGCGTTCAT GACCGCGTTC GTCGCGCTGA ACACGCAGAA GAAGCCGCTC GACAACGAGA AGGTGCGCGA GGCGCTGAAC CTCGCGTTCG ACCGCACGAC CTACCTGAAG GTCGTGTTCG ACAACACGGC GACCGCCGCG AACAACCCGT ATCCGCCGAA CACGTGGAGC TACGCGAAGG ACATCGCGCC GTATGCGTAC GATCCCGCGA AGGCGAAGCA GCTGCTCGCG TCGGCCGGGT TCCCGAACGG CTTCTCGACG ACGATCTGGA CGCGCCCGAC GGGCAGCGTG CTGAACCCGA ACCCGAAGGC CGGCGCGGAG CTGCTGCAGG CCGACCTCGC GAAGATCGGC GTGAAGGCCG AGGTGAAGGT GATCGAATGG GGCGAGCTGA TCAAGCAGGC GAAGCTCGGC CAGCATGACA TGCTGTTCAT GGGCTGGGCC GGCGACAACG GCGATCCGGA CAATTACCTG TCGCCGCTGT TCAGCTGCAA CGCGGTGAAG TCGGGCATCA ACTTCGCGCG CTTCTGCGAC GCGCAGCTCG ACAAGCTGAT CGCCGACGGC AAGGCGACCG CCGATCAGGC CAAGCGCGCG AAGCTGTACG AATCGGCGCA GAAGGTGATC CACGACCAGG CGCTGTGGAT TCCGCTCGGC TACCCGACCG CCGCCGCGCT CACGCGCCCG AACGTGAGCG GCTATCACGT CAGTCCGTTC GGCCGCCAGA ACTTCACGAC CGTCTCCGTG CAGTAA
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Protein sequence | MHAKLFTAAA LAAALAAPGL AVAKPLTVCT ESSPDGFDVV QYNSLVTTNA SADVIFNTLV SYDEAAKKVV PALADKWEAS ADGLTYTFHL RPNVAFQTTD YFKPGRPLNA DDVVFTFSRM LDDANPWHKV AGASGFPHAQ SMGLVKLVKS VTKVDDSTVK FVLNEPNATF VSILTMGFAS IYSAEYADQL LKAGKQADLN AKPVGTGPFV LKSYTKDALI RYDVNPTYWG TKPKVDRLIY AITPDASVRM QKVKAGECQI ALSPKPQDVL AAKGESALKV VQTPAFMTAF VALNTQKKPL DNEKVREALN LAFDRTTYLK VVFDNTATAA NNPYPPNTWS YAKDIAPYAY DPAKAKQLLA SAGFPNGFST TIWTRPTGSV LNPNPKAGAE LLQADLAKIG VKAEVKVIEW GELIKQAKLG QHDMLFMGWA GDNGDPDNYL SPLFSCNAVK SGINFARFCD AQLDKLIADG KATADQAKRA KLYESAQKVI HDQALWIPLG YPTAAALTRP NVSGYHVSPF GRQNFTTVSV Q
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