| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2927 |
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| Symbol | |
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| ID | 4310671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3226093 |
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| End bp | 3228111 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150767 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_774817 |
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| Protein GI | 115352978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.600674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGC AGGCGGCGGT ACCGCCCGCG GCGGCCGCGC CGCGCGGCGG CCGGGGCGGC
CAGGGCGGTG ATGCGGAGCC CTATGACACA ATAGGCGATC CGCATCGCCA GGAAGTCACG
TCCGTGAAGC GCCGCCTGCT CATCCTCGTC GTGCTTGCCG TCGCGCTCGC GGCGGCGTGC
GCGCTGACGT GGACCATCAC GTGGCGGCGC GGCGTCGCGG AGCTGCAGCG CAACGCCGCG
GTGCGGGTCG ACCGCACCAC CAACGCGCTC AAGAGCACGC TCGACCGCTA CGAATCGCTG
CCTTATCTAC TCGGCAGCCA TCCGTACGTG CAGGACCTGC TCGCCGAGCC GAAGCGCGCC
GATTTCACCG GGCGCGCGAA CCGCTATCTC GAAGATCTCA ACGAACACGC GCACGCGACC
GTCACCTACG TGGTCGGCGC GGACGGCCTG TGCGTCGCCG CCAGCAACTG GCGCGCGCCC
GACAGCTTCG TCGGGATCGA ATACCGCTTC CGTCCGTATT TCATCGACGC GATGAACGGC
CGGGTCGGCC GCTTCTTCGG GATCGGCACG ATCTCGCGCG ACCCCGGCTA CTACATCTCG
CAGCCGGTGT GGCGCGACGG CAAGATCGCG GGTGTCGTCG TCGTGAAACT CAATCTCGAA
TGGTTCCAGG GCGCCGACGC GTCCGAACCG CTCGTCGTCG CGGACGATCA CGGCGTCGTG
TTCCTGTCGT CCGTGCCCGC GTGGAAATAC CACACGCTGC ATCCGTTGAC GGGGCCCGTC
GCCGCGTCGA TCTACGAGAC GCGCCAGTAC GCGCAGCAGC CCGTCACGCC GCTGCCGCTG
CGCGTCGAGC AGGTGCTCGG CGCGGACGCG GAGATCGTGC GCCTCGGCCC GGGCCTGCGC
GCACCGCGCT TTCTGGCGAG CAAGCGGCGG ATCGGCGAAC CCGACTGGCT GCTCGTCACG
CTCGCGCCGA TCGCCCCGAT CGACGCCGAT GCGCGCAACG CGACCATCGT CACGGGCTTC
GGCTTCGTGT CGGTGGCGTT GCTCGCGTTC TACTGGCGCA TGCGCCGCGC TCGCGTGCGC
GAGATGATCC GCGGCCGCGC GCTGCTGCAG CAGGCGTATG CGGAGCTGAA CCGGCGCGTC
GAGGAACGCA CGGCCGATCT GTCGGAGGCA AACGAGCAGT TGCAGAAGGA AGTCGGCGAC
CGGATCCGCG CGGAACAGGA ATTGCGCGCC GCGCACGACG AACTGATCCA GGCGAGCAAG
CTCGCCGCGC TCGGCCAGAT GGCGGCCGGC ATCACGCATG AACTGAACCA GCCGCTCGCG
GCATTGCGCA GCTTCTCCGA CAACACGCGC GTGCTGCTCG ATCGCGGCGA GCAGGCGGCC
GCGCGCGAGA ACCTCGAGGC GATCGCCGCG CTGACCGAGC GGATGGGCAA GATCACCAAC
CAGCTGAAAC TGTTCGTCGG CCGCGCGAAG CCGCGCAACG AACAGGCGCT GGTCGTGCGC
GCGCTGCGCA GCGTGCTGTC GCTGCTCGGC GAACGGCTGC GCGGCGTCGC GCTCACGCTG
ACGCTGCAGG ATGCGACCGT GTCGCCCGCG CAGGATGCGC CGCTCGACCT CGCGCGCGAT
TACCCGGACC TCGTCGCCCG CTGCGAGGAC TTGCGCCTCG AACAGGTGCT GATCAACCTG
CTCGGCAACG CGCTCGACGC GGTCGCGGGT GTCGCCGCGC CGGCGATCGA AGTGACGATC
GCGGTGTCGG TCGCGACGCT GGCGGTCGAG GTGCGCGACA ACGGCCCGGG CATCGCGCCC
GACCTGCTGC CGCGCTTGTT CGAACCGTTC TTCACGACCA AGGAAATGGG GCGCGGGCTC
GGGCTCGGCC TCGCGATCTC GTCGTCGATC GCGAGCGACG CGGGCGGCGC GCTGACCGCG
CGCAACGCGC CGTCCGGCGG CGCGCTGTTC GTCTTGACGC TGCGGCGCAC GCGCACGCAT
CATCCGGACT CCCTGTCCGA GCCGGCGGGC TCGCGCTAG
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| Protein sequence | MSEQAAVPPA AAAPRGGRGG QGGDAEPYDT IGDPHRQEVT SVKRRLLILV VLAVALAAAC
ALTWTITWRR GVAELQRNAA VRVDRTTNAL KSTLDRYESL PYLLGSHPYV QDLLAEPKRA
DFTGRANRYL EDLNEHAHAT VTYVVGADGL CVAASNWRAP DSFVGIEYRF RPYFIDAMNG
RVGRFFGIGT ISRDPGYYIS QPVWRDGKIA GVVVVKLNLE WFQGADASEP LVVADDHGVV
FLSSVPAWKY HTLHPLTGPV AASIYETRQY AQQPVTPLPL RVEQVLGADA EIVRLGPGLR
APRFLASKRR IGEPDWLLVT LAPIAPIDAD ARNATIVTGF GFVSVALLAF YWRMRRARVR
EMIRGRALLQ QAYAELNRRV EERTADLSEA NEQLQKEVGD RIRAEQELRA AHDELIQASK
LAALGQMAAG ITHELNQPLA ALRSFSDNTR VLLDRGEQAA ARENLEAIAA LTERMGKITN
QLKLFVGRAK PRNEQALVVR ALRSVLSLLG ERLRGVALTL TLQDATVSPA QDAPLDLARD
YPDLVARCED LRLEQVLINL LGNALDAVAG VAAPAIEVTI AVSVATLAVE VRDNGPGIAP
DLLPRLFEPF FTTKEMGRGL GLGLAISSSI ASDAGGALTA RNAPSGGALF VLTLRRTRTH
HPDSLSEPAG SR
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