Gene Bamb_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2897 
Symbol 
ID4310746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3196764 
End bp3197807 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID638150737 
ProductSURF1 family protein 
Protein accessionYP_774787 
Protein GI115352948 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGAA ATGTCACGGC AGCCGGCGTG GCGAATGCAT CAACGCCCGA TCGGCAGGCC 
GGTCGAATGG ATCCAGCCCA TCCAGTTCGC GAACAGGATG AACAGGAACA GCGACACCGA
CAGCCCGACG CGGGTGGCCA GCGACCAGAC CATGCGCTTC GTATGGCCGC GGTCGTGCAT
CATGAAGTAG AGCGCCGAGC CCATGCTGGC GATGATGAGG ACGAAGGCGA TGGGAACGAG
GATGTGCATG ACACGAACCG GACGACGGCA ATTCGAAAGG AAGAGGATAA TTATCGCACT
TCGCTTTCGC GAATGCGCCC GGCGGGCGGC CCGATGAAGA TCCGCTGGCT GCCTGCGCTG
CTGATTCTCG TCGTCGTCGC GGTCACGATC CGCCTCGGGT TCTGGCAGCG CGACCGCGCG
CACCAGAAGG AAGCTCTGCA GGCGAGCGTG GTGCGCTACG AGCACGCGGC GCCCGTCGAC
GTCGGTGCTC AGCCGATTCC GCTCGCGTCG ATCGAGTTCC ACCGCGTGCG GGCGCGGGGC
CGCTTCATGC CGGAGCAGGC GGTGTTCCTC GACAATCGGC CGTATAACGA CCAGCCGGGT
TTTTACGTCG TGATGCCGTT TAAACTCTCG GGCGGCGGCG TCGTGCTGGT GAACCGCGGC
TGGCTGCCGC GCAACATCGC CGATCGCACG GCGATCGAGC CGTTCGCGAC GCCCGACGGC
GAGATCGAGA TCGAAGGCAT TGCGCGCGCC GACGCGTCGC GTGCGTTCGA GCTCGGCGAA
GGCGGCTCGG CCGCGCACCA GAAAATCCGG CAGAACCTGG ACGTCGCCGC GTATGCGAAG
GAAACGGGGC TGCCGCTGCA GCCGTTCGTG ATCCAGCAGA CGAGCGACGA CGGCGACAAG
CTCGTGCGCG ACTGGCCGGC GGCGACGACC GGCGTCGAGC GCAATTACGG TTACATGTTT
CAGTGGTGGG CCATGGCGGC CGCCGCGCTC GGCTTCGGCC TGTACGCCGC GCGGCGTGCG
GCGAAGAAGT CGGCCGGCGC GTGA
 
Protein sequence
MRRNVTAAGV ANASTPDRQA GRMDPAHPVR EQDEQEQRHR QPDAGGQRPD HALRMAAVVH 
HEVERRAHAG DDEDEGDGNE DVHDTNRTTA IRKEEDNYRT SLSRMRPAGG PMKIRWLPAL
LILVVVAVTI RLGFWQRDRA HQKEALQASV VRYEHAAPVD VGAQPIPLAS IEFHRVRARG
RFMPEQAVFL DNRPYNDQPG FYVVMPFKLS GGGVVLVNRG WLPRNIADRT AIEPFATPDG
EIEIEGIARA DASRAFELGE GGSAAHQKIR QNLDVAAYAK ETGLPLQPFV IQQTSDDGDK
LVRDWPAATT GVERNYGYMF QWWAMAAAAL GFGLYAARRA AKKSAGA