Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2872 |
Symbol | |
ID | 4310721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3165470 |
End bp | 3167116 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638150712 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_774762 |
Protein GI | 115352923 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGCA ACCCGCAAGA CAAGTACCGT CCGTTCGAAC CCGTCCGCCT CAATGGCCGC CGCTGGCCGA CCCGCACCAT CGAGCGTGCG CCGGTCTGGA TGAGCACCGA TCTGCGCGAC GGCAACCAGT CGCTGATCGA GCCGATGAGC ATCGAGCAGA AGCTGGAGTT CTTCGACATG CTGGTTGCGA TCGGTTTCAA GGAGATCGAA GTCGGTTTTC CGTCGGCGTC GCAAACCGAC TTCGATTTCG TGCGCAAGCT GATCGACGAC AAGCGCATCC CCGACGACGT GACGATCGAA GTGCTCGTGC AGTCGCGCGA AGACCTGATC GCACGCACCT TCGACGCGCT CGAAGGCGTG CCGCGCGCGA TCGTGCACCT GTACAACGCG ATCTGCCCGT CGTTCCGCCG CATCGTGTTC GGGATGTCGA AGGACGACGT GAAGGCACTC GCGGTCGACG GCACGCGGCT TATCAAGGAA CATGCGGCGG CCCGTCCGGA CACGCACTGG ACCTATCAGT ACTCGCCGGA AACCTTCAGC ATGACCGAAC TGACGTTCGC GCGCGAAGTG TGCGACGCGG TCGCGCAGGC ATGGCGGCCG ACCCGCGATC ACAAGATGAT CGTCAACCTG CCGGCGACCG TCGAAGCCGC GAGCCCGAAC GTGTTCGCCG ACCAGATCGA GTGGATGGAC CGCAATCTCG CGTATCGCGA CAGCATCGTG CTGTCCGTGC ATCCGCACAA CGATCGCGGC ACCGCGGTCG CGGCCGCCGA ACTCGCGCTG CTCGCGGGCG CCGACCGCAT CGAGGGCTGC CTGTTCGGCA ACGGCGAGCG CACCGGCAAC GTCGATCTCG TCACGCTCGC ACTGAACCTC TATACGCAGG GCATCGACCC GGGCCTCGAT TTCTCCGACA TCGACGCGGT GCGCCGCGTG GTCGAGCGCT GCAACCAGAT TCCGGTGCAT CCGCGCCATC CGTACGCGGG CGACCTCGTG TTCACCGCGT TCTCCGGCTC GCACCAGGAC GCGATCCGCA AGGGTTTCGC GCAGCAGCGG CCCGACGCGG TGTGGGAAGT GCCGTATCTG CCGATCGACC CGGCCGATCT CGGCCGCAGC TATGACGCGG TGATCCGCGT GAACAGCCAG TCCGGCAAGG GCGGCGCGAC GTTCCTGCTC GAACGCGGGA TGGGCTTCAC GCCGACGCGC CGCGTGCAGA TCGAATTCAG CCACGCGGTG CAGACGCTCG CCGACGCGTC CGGCGAGGAA GTGACCGGCG ATGCGATCTG CGCGCTGTTC GCCCGCGAGT TCTTCGAAAC CGCCGGCCCG GCCGCACGCC ACGGCGACGC CGCGCGCTGG CAGAATCGCG ACATCGCGGC TGCGCCGCCG GCCGACGCGA CGCCCGAAGA TGCCGTGCGA CGGATGGCCG CGGCCTTCGC GACGGCGGCC GGCGCGACGA TCGACGTCGC GTCGTGCGAA CACGCGCGCA CGACGGACGG CAGGATCGCG GTATCGGTCG GCTGCCGGAT CGGCGATGCG CCGCTGCGGC ATGGCGTCGG CGTGCACGCC GATGCGGCGA GCGCCGCGCT CGACGCGGTC GTCAGCGCGA TCAACCGTTC GGCCTGGCAT TGCGCCGACC GACGCGCGGC GGCCTGA
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Protein sequence | MKRNPQDKYR PFEPVRLNGR RWPTRTIERA PVWMSTDLRD GNQSLIEPMS IEQKLEFFDM LVAIGFKEIE VGFPSASQTD FDFVRKLIDD KRIPDDVTIE VLVQSREDLI ARTFDALEGV PRAIVHLYNA ICPSFRRIVF GMSKDDVKAL AVDGTRLIKE HAAARPDTHW TYQYSPETFS MTELTFAREV CDAVAQAWRP TRDHKMIVNL PATVEAASPN VFADQIEWMD RNLAYRDSIV LSVHPHNDRG TAVAAAELAL LAGADRIEGC LFGNGERTGN VDLVTLALNL YTQGIDPGLD FSDIDAVRRV VERCNQIPVH PRHPYAGDLV FTAFSGSHQD AIRKGFAQQR PDAVWEVPYL PIDPADLGRS YDAVIRVNSQ SGKGGATFLL ERGMGFTPTR RVQIEFSHAV QTLADASGEE VTGDAICALF AREFFETAGP AARHGDAARW QNRDIAAAPP ADATPEDAVR RMAAAFATAA GATIDVASCE HARTTDGRIA VSVGCRIGDA PLRHGVGVHA DAASAALDAV VSAINRSAWH CADRRAAA
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