Gene Bamb_2853 details

Gene Information

• Locus tag: Bamb_2853
• ID: 4310860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3147488
• End bp: 3148027
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638150692
• Product: putative PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_774743
• Protein GI: 115352904
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAACG CCTTGATATC GCCGAACATG GAAAATCAGT CTGCCGCCGC AAGGAGACCC 
CAGGCCGCCC TATCGCCTGC CAACATGAAT CGCCTAGCCA AAATCCTGCC CATAGAGAAC 
GTCGTCATCG ACCTCTCCGT CACCAGCAAG AAACGCGTCT TCGAACAAGC CGGGCTGATG 
TTCGAGAATC AGAACGGCGT CGCCCGCAGC ACCGTCACGG ACAACCTGTT CGCGCGCGAG 
CGCCTCGGCT CGACCGGGCT CGGCGAAGGC GTCGCGATTC CGCACGGGCG CATCAAGGGG 
CTCAAGCACC CGCTCGCCGC ATTCGTGCGG CTCGCCGATG CGATCCCGTT CGAAGCGCCC 
GACGGCCAGC CGGTCGGTCT CCTGATTTTC CTGCTCGTCC CCGAGCAAGC TACCCAACAG 
CACCTCGAGA TCCTGTCGGA AATCGCGCAA CTGCTATCCG ATCGCGACGC GCGCGAGCGT 
CTGCACAACG AAACAGATCT CGCCGAGTTG CATCGCGTGC TCACTCAGTG GCAACCTTGA 

 

Protein sequence

MPNALISPNM ENQSAAARRP QAALSPANMN RLAKILPIEN VVIDLSVTSK KRVFEQAGLM 
FENQNGVARS TVTDNLFARE RLGSTGLGEG VAIPHGRIKG LKHPLAAFVR LADAIPFEAP 
DGQPVGLLIF LLVPEQATQQ HLEILSEIAQ LLSDRDARER LHNETDLAEL HRVLTQWQP