| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2831 |
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| Symbol | |
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| ID | 4310838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3120738 |
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| End bp | 3123401 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638150670 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_774721 |
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| Protein GI | 115352882 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCTCG GCTTCGTGAC GCCCGCCCAC GCGCTCCAAG CGGCGCCAGT CGGCCGCGAG
GCCGACGGCG CAACCGCTCT CGCGTACAAC TTCGACAGCC GGCTGCTGCT GGGCACGCCG
CTCGGCGTCG CGAATATCGA GCGCTTCAAC CGCACGCATG CCGTCGATCC CGGACGATAC
CAGGTCGATC TGTACGTGAA CGATCGCTTC GTTTCGCGGC GCGACATCAC GTTCCGCAAT
ACAGATGACG GCGCGCTTTA CCCGTGCCTC AGCGATGCAC TGCTGACGTC CGCGGGCGTA
TTGCTGCGCG ACGTCGCGGA TGCCCGCTTG CCGCACGCCG CGGCCGGACA GGCTGCGCCC
GACGGCACGC AACCTTCACC CGAACCAACA CCGGATCACG CGGACGCGCT CCCGGCGGAT
GCACCGACGG CATTCTGCGG CCCGCTGACG AAGCGCGTGC CGGGCGCGCA GACCACGTTC
GATCTGACGC GCCTGCGGCT CGACATCACC GTCCCGCAGT TCGAGATGAG AGTCGCACCG
CGCGGCGCAG TCGATCCCGC ATCGCTGGAC GCGGGCGAAG CCGCCGCGTA CGTGAACTAC
GACGCGAGCT ACTACACATC TTCGGCGTAC GGCGTGCGCG CGAATTCGGT CTACACGGGC
CTCAATGCAG GCGTGAACGT CGGCCTGTGG CGTGTGCGCC AGCAGTCGTC GTTCACCTAC
AATGGAGGCA CCGGCAACAG CATCTCCCGC TGGAACAACA TCCGCACCTA TGCGGAGCGG
CCGCTGATCG GCATGCGCAG CCAGCTCACC ATCGGCCAGA GCTTCACGAG CGGCAGCCTG
TTCAGCACGG TGGGCTATAC GGGCGTGCGC CTGGAATCCG ACGATCGCAT GCTGCCCGAC
TCGATGCGCG GCTACGCGCC GGTCGTCAAT GGCGTCGCGC AGACCAACGC GCGCGTCGTC
GTGAACCAGA ACGGCCACGT GATCTACCAG ACGACGGTGG CCCCCGGGCC GTTCCGGATC
GCGGACCTGA ATCCGACCAG CTACCAGGGC GATATCGACG TCGAGGTGCA CGAGGCGAAC
GGCCAGGTGT CGCGCTTCAC GGTGCCGTTC TCCGCAGTGC CGAATTCGAT GCGCCCCGGC
CTGTCGCACT ACAGCGTCAC GCTCGGCCAG GTGCGGCAAA TCGAAGGCTC GCACGCGAGA
TTCGCCGACC TGACCTACCA GCGCGGCCTG ACCAATTCGC TGACGGCCAA CGGCGCCGTG
CGCGTCTCGC TCGACTATCA GTCGGTGCTG GCCGGCGCCG TGCTAGGCAC GCGGATCGGC
GCGTTCGGCT GGAACACGAC CTGGTCTCAC GCGCGCAACG CGCAGGGCGG CTGGCTGAAC
GGCTGGATGA GTGCCATCAC GTACAGCCAC ACCTTCACGC CGACCCAAAC GACCTTCTCG
CTGGCCGGCT ATCGCTATTC GACGAAAGGC TATCGCGAGT TCATCGACGC GCTCAGCGCG
CGCGAAGCTT ACCGGCGCGG CGAAACCTGG GCGTCGTCGA CCTACCAGCA GCGCGACCAG
TTCACGCTCA ACGTGAACCA GGATTTCGGC AAGTACGGCG CACTGTCGCT GTCCGCCACG
ACCAGCAGCT ACTACGAGTC GCGGCCGCAC GACACGCAGG TCCAGCTCAG CTACAACAAC
CACTACCACT CGATCAGCTA CAACCTGTCG TTCGTCCGGC AGAAGACGGC CACCGTCGTC
GCGCCGGGCA GCGGGCCGAT GCAGAACCTC CTGCCCGGCT ACGGACGGGC GGGCGCGGAC
ACGCGGACGA GCAACGTGCT GATGCTGACC GTCTCGATCC CACTCGGATC GGGGCCGCGC
ACCGCATCGC TGTCGGGCAG TGTGTCGCAC GGCAACGATC AGGGCACGTC GTACCAGGCG
TCGCTCAGTG GCATTGCCGA CCGCGCCCAG ACGCTCAGCT ACGGCCTCAG CCTGTCGGGC
GAAACGCGCA ACGGCGCGCG TACCTACAGC GGCAACCTGC AGAAGAACCT GTCAATGATC
ACGGCGGGCG CGAGTTATTC GAACGGCGAT CATTTCTGGC AGGTCGGTGC CACCGCGCGC
GGCGCGATCG TCGCGCACCG CGGCGGCGTC ACGTTCGGGC CGTATCTCGG CGATACGTTC
GGCATCGTCG AGGCCAAGGG TGCGCGAGGC GCGACCGTGC GCAGCGGGAT GGGCGCGCGC
GTCGACCGCT TCGGCTACGC GATCGTGCCG TCGCTCACGC CCTACCGCTA CACGGACGTT
GCGCTCGAAA CACAAGGCAT CGACCGCGAC ACTGAACTGA TCGGCAACCA GGTGCGGGTC
GCGCCGTATG CGGGCTCGGC CGTGCTGCTC AAGTTCGCGA CACTGACCGG CCATGCGGTC
CTGATCCAGG GTGCGCGCGC CGACGGCGAA CGGCTGCCGC TGGGCGCGAA CGTGCTGGAC
GGCAAGGGCA CGTCGATCGG CGTGGTCGGG CAAGGCGGGC TCGCCTATGC GCGCGTGCCG
TCGGCGCACG GTACGGTCAG GGTCCGCTGG GGCAAGCGGC GTGAGGACCA GTGCGCGATG
CGCTACGACC TGCCCGCGCA GTCGGCGACG AAGGCGCCGA TCGTGCGCAT TCGCGCGCAA
TGCCTGCCGC TCGCGCTGAA ATGA
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| Protein sequence | MALGFVTPAH ALQAAPVGRE ADGATALAYN FDSRLLLGTP LGVANIERFN RTHAVDPGRY
QVDLYVNDRF VSRRDITFRN TDDGALYPCL SDALLTSAGV LLRDVADARL PHAAAGQAAP
DGTQPSPEPT PDHADALPAD APTAFCGPLT KRVPGAQTTF DLTRLRLDIT VPQFEMRVAP
RGAVDPASLD AGEAAAYVNY DASYYTSSAY GVRANSVYTG LNAGVNVGLW RVRQQSSFTY
NGGTGNSISR WNNIRTYAER PLIGMRSQLT IGQSFTSGSL FSTVGYTGVR LESDDRMLPD
SMRGYAPVVN GVAQTNARVV VNQNGHVIYQ TTVAPGPFRI ADLNPTSYQG DIDVEVHEAN
GQVSRFTVPF SAVPNSMRPG LSHYSVTLGQ VRQIEGSHAR FADLTYQRGL TNSLTANGAV
RVSLDYQSVL AGAVLGTRIG AFGWNTTWSH ARNAQGGWLN GWMSAITYSH TFTPTQTTFS
LAGYRYSTKG YREFIDALSA REAYRRGETW ASSTYQQRDQ FTLNVNQDFG KYGALSLSAT
TSSYYESRPH DTQVQLSYNN HYHSISYNLS FVRQKTATVV APGSGPMQNL LPGYGRAGAD
TRTSNVLMLT VSIPLGSGPR TASLSGSVSH GNDQGTSYQA SLSGIADRAQ TLSYGLSLSG
ETRNGARTYS GNLQKNLSMI TAGASYSNGD HFWQVGATAR GAIVAHRGGV TFGPYLGDTF
GIVEAKGARG ATVRSGMGAR VDRFGYAIVP SLTPYRYTDV ALETQGIDRD TELIGNQVRV
APYAGSAVLL KFATLTGHAV LIQGARADGE RLPLGANVLD GKGTSIGVVG QGGLAYARVP
SAHGTVRVRW GKRREDQCAM RYDLPAQSAT KAPIVRIRAQ CLPLALK
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