Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2817 |
Symbol | |
ID | 4310824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3108578 |
End bp | 3109480 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638150656 |
Product | polysaccharide deacetylase |
Protein accession | YP_774707 |
Protein GI | 115352868 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCGC CGTCATCCGT TTCACCGCCG CAGCCCGGCG ATGCGCGCCG CTGGAAGCCA ACGCCGCTGA TCGCGGGCAC CGCCGCGCTG CATGCGGGCG CGCTCGCGGC CGTCGTCGCG CAGCCGGCCG CGTGGCCGTG GGCCGCCGGC GGCGTGGTCG CCTCGCATCT CGCGCTGACG GCCGCCGGCC TGTGGCCGCG CAGCGCATTG CTCGGGCCGA ACTGGACGCG GCTGCCGGCC GGTGCCGGCC GCCGGATCGC GCTGACGATC GACGACGGCC CGGACCCCGA CGTCACGCCG CGCGTGCTCG ACCTGCTCGA TCGTTACGAT GCACGCGCGA CGTTCTTCTG CATCGGCGAT CTCGCACGAC GCCATCCGCA ATGGATCGAA GCGATCATCG CGCGCGGCCA CGCGGTCGAG AACCACAGCC AGCGGCACCG GCATACGTTC TCGCTGTCGG GGCCCGCCGC GCTGCGGCGC GAAATCGCCG CCGCGCAGCA GACGCTGACC GAGATCTCCG GCATGCGACC GCGCTTCTTC CGCGCGCCGG CCGGCCTGCG CAATCCGTTT CTCGAGCCGG TGCTCTGCGA GCTCGGGCTG CAGCTCGCCA GCTGGACGCG CCGCGGCTTC GACACGCGCG AGCACGACGC GGACACCGTC ACGCGCCGCC TGCTGAACGG CCTCGCGCCA CACGACATCC TGCTCGTGCA TGACGGCCAT GCGGCGCGCG ATGCGCGCGG CGAACCGGTC GTGCTCGACG TGCTGCCGGC GTTGCTGCGC GCGGCCGCCG ATGCGCGGTT GCAGTGGACC ACGCTGCGCG CCGCGCTTGC GCCCGAAGCG CCCGAAGCGC CCGAAGCGCC CGGCCAGCCG GGCATGCTGG CACCCCCGTT TGATAAAATC TGA
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Protein sequence | MNAPSSVSPP QPGDARRWKP TPLIAGTAAL HAGALAAVVA QPAAWPWAAG GVVASHLALT AAGLWPRSAL LGPNWTRLPA GAGRRIALTI DDGPDPDVTP RVLDLLDRYD ARATFFCIGD LARRHPQWIE AIIARGHAVE NHSQRHRHTF SLSGPAALRR EIAAAQQTLT EISGMRPRFF RAPAGLRNPF LEPVLCELGL QLASWTRRGF DTREHDADTV TRRLLNGLAP HDILLVHDGH AARDARGEPV VLDVLPALLR AAADARLQWT TLRAALAPEA PEAPEAPGQP GMLAPPFDKI
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