Gene Bamb_2815 details

Gene Information

• Locus tag: Bamb_2815
• ID: 4310822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3105457
• End bp: 3106101
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638150654
• Product: hypothetical protein
• Protein accession: YP_774705
• Protein GI: 115352866
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.038116
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCG TTCGCCGCTT CCTGTCACTG TTGCCGCTGT CGCTCCTGCT CGCGCCGCGC 
CGCGCCGCGC GCCTGTTCGC CGTCACGGCG GCCGTCGCGC TCGCGCTGCC CGCGCAGGCG 
GCCGACACCG GTTCGGCATG GACCCTCGAC CGGCTGATGT CGACGCTCGC GCAGCACAAG 
TCCGGGCGTG CGACGTTCAC CGAGACGAAG ACGCTGTCGA TCGCCGCGCA GCCGCTCGAA 
TCGTCGGGCG AGCTCGTGTT CGTCGCGCCC GACCATCTCG AGAAGCACAC GCTGAGCCCG 
AAGCCCGAAC ATCTCGTCGT CGACGGCGAC ATGCTCACCG TCGAGCGCAA CAACCGCAAA 
TTCACGCTCG CGCTCGCGCG CTACCCCGAG CTCGGCGCCT TCATCGACAG CATCCGCGCG 
ACGCTCGCCG GCAACCGCTA CGCGCTCGAG CAGGTGTACA AGGTCGCGCT CGCCGGCCGT 
GGCGACGACT GGACGCTGAC GCTCACGCCG CTCGATTCGC GGATGCTGAA GGTCGTCAGC 
ACGATCACGC TCGACGGCAC GCGCGACGTG TTGCGCAGCG TCGCGATCCG GCAGGCCGAC 
GGCGACCATT CGACGATGCG CCTGCAACCC GTCCCGGCGA ACTGA 

 

Protein sequence

MTAVRRFLSL LPLSLLLAPR RAARLFAVTA AVALALPAQA ADTGSAWTLD RLMSTLAQHK 
SGRATFTETK TLSIAAQPLE SSGELVFVAP DHLEKHTLSP KPEHLVVDGD MLTVERNNRK 
FTLALARYPE LGAFIDSIRA TLAGNRYALE QVYKVALAGR GDDWTLTLTP LDSRMLKVVS 
TITLDGTRDV LRSVAIRQAD GDHSTMRLQP VPAN