| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2795 |
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| Symbol | |
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| ID | 4310369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3083068 |
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| End bp | 3084663 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638150634 |
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| Product | major facilitator transporter |
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| Protein accession | YP_774685 |
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| Protein GI | 115352846 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGTCC ATACTGCCGC CCACCATTCG AGCGGGCAAG TCCTGCCGTT CCGTGAATCG
CTGCTGGCGA TGATCGGGAT CTCGTTCGTC ACCATGCTCG TCGCGCTCGA CCAGACGGTC
GTCGGCACCG CGTTGCCGAC CATCGTCGCC GAACTCAGGG GCTTCGACCT GTACGCGTGG
GTGGCGACCT CGTACCTGCT CAGTTCCGTG ATCACCGTGC CGATCTTCGG CCGCCTCGGC
GACTATTACG GCCGAAAGCC GTTCGTCATC GCGTCGATCG TCGTGTTCAC CGGCGCGTCG
GTGCTATGCG GAATGGCGAA CGACATGCTG TATCTGGTGC TCGCGCGCGG GCTGCAGGGG
ATCGGCGGCG GGATGCTGGT GGGCACCGCG TTCGCGTGCA TTCCCGACCT GTTCCCCGAT
TCCATCGTGC GGCTGCGCTG GCAGGTGCTG ATGAGTTCCG CGTTCGGCAT CGCGAACGCG
GTCGGGCCGT CGCTCGGCGG GATCCTGACG CAGTCGTTCG GCTGGCGCTC GGTGTTCTAC
GTGAATCTGC CTATTGGCCT GCTGTCGCTG TTCTTCGTGT GGCGCTACCT GCCGCACCTG
CGGCACGTCG AGCACGACCG CAAGATGCGC CTCGACTGGC CCGGCGCACT GCTGATCGCG
CTGTCGCTCG GCGCGCTGCA GCTGTTCGTC GAATGGCTGC CGAAGTACGG TGTCATGAGC
TGGGCGTCGC TGCTGCTGGT CGTCGCGGTC GGCGCCGGTG TCGGGTTGTG GCAGTGGGAA
AAGCGCTGCG CGCAGCCGAT CCTGCCGTTC GACATGTTCG GCAACCGCGC GCTGTCGGCG
CTGTTCGTGC TCGCGATCCT CGCCGGCTTC TCGATGTTCT CGCTGCTGTT CTACGCGCCG
CTGCTGTTCC AGGGCGGCTT CGGGATGTCG CCGAAGGAGG CGGGGCTCGT GATCACGCCG
CTCGTCGTGT TCATCACGAT CGGCAGCATC ATGAACGGCC GCGTCATCAC GCGCATCCGC
CATCCGAACG CGATGCTGCA CGTCGGTTTC GTGCTGTTCG CGATCGCGTG CGCGGGCATC
GTCGTGTCGA CCCACGCGAC GCCGACCTGG ATGCTGATGG CGCTGATGGT GGCCGGCGGC
ATCGGTCTCG GTTTCGTGCT GCCCAACCTC ACCGTGTTCG CGCAGCAGAC GGCCGGCCGC
GAGCACCTCG GCATCGCGAC CGCGCTGCTG CAGTCGCTGC GGATGGTCGG CGGGATGCTC
GGCACGGCGC TGACGGGCAC GCTCGTCAAC CAGATGTATT CGAGCGGCGT GCGCGATGCG
CTGTCGGGCG ACCACGCGCT GCAATGGCAT GCGCGGCTCG CCGATCCGCA GATCCTGATC
GATCGCGCCG CGCAAGGCGG TCTCGTCGCG GAGCTGACCC GCGCCGGGCA TAATGGCGCG
CTGCTGCTGG AAGCGGCCCG CGAATCGCTG GTCGGCGCGA TTCACCTGGG CGTCGCGATG
GCGGCCGTCG TCGCCGTGGT GTCGGTGTGG CAGTGCCGCC GCGTGCCGCC GATCGCGCTG
CGGCGCAAGA TCGAGCCGCA TGTCGCGGCC GATTGA
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| Protein sequence | MAVHTAAHHS SGQVLPFRES LLAMIGISFV TMLVALDQTV VGTALPTIVA ELRGFDLYAW
VATSYLLSSV ITVPIFGRLG DYYGRKPFVI ASIVVFTGAS VLCGMANDML YLVLARGLQG
IGGGMLVGTA FACIPDLFPD SIVRLRWQVL MSSAFGIANA VGPSLGGILT QSFGWRSVFY
VNLPIGLLSL FFVWRYLPHL RHVEHDRKMR LDWPGALLIA LSLGALQLFV EWLPKYGVMS
WASLLLVVAV GAGVGLWQWE KRCAQPILPF DMFGNRALSA LFVLAILAGF SMFSLLFYAP
LLFQGGFGMS PKEAGLVITP LVVFITIGSI MNGRVITRIR HPNAMLHVGF VLFAIACAGI
VVSTHATPTW MLMALMVAGG IGLGFVLPNL TVFAQQTAGR EHLGIATALL QSLRMVGGML
GTALTGTLVN QMYSSGVRDA LSGDHALQWH ARLADPQILI DRAAQGGLVA ELTRAGHNGA
LLLEAARESL VGAIHLGVAM AAVVAVVSVW QCRRVPPIAL RRKIEPHVAA D
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