| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2780 |
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| Symbol | ubiB |
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| ID | 4310354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3065129 |
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| End bp | 3066706 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638150619 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_774670 |
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| Protein GI | 115352831 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTT TCCGTTTCAT CAAGATTGTC TACACCGTCA TCCGCTTCGG CCTCGACGAG
GTGATGCTGT CCCGGATCGA CGACCGACGC GTGAAGCTGC TGCTGCGGAT CACGACGATC
GGCCGCCGCT ATTCCGATCC GCCCGCCGTG CGGCTGCGTC ACGCGCTCGA GAGCCTCGGC
CCGATCTTCG TGAAGTTCGG CCAGGTGCTG TCGACGCGCC GCGACCTGCT GTCGGTCGAT
TTCGCGAACG AACTCGCGAA GCTGCAGGAC CAGGTGCCGC CGTTCGATTC GGCTGTCGCG
ATAGCGATCA TCGAGAAGTC GCTCGGCGCG CCGGTCGACG AGCTGTTCGA CGAATTCGAG
CGCGAGCCGA TCGCGAGCGC GTCGATCGCG CAGGTGCATT TCGGGAAGTT GAAGCAGGGC
GTGCACGCGG GCAAGGCCGT CGCGGTCAAG GTGCTGCGCC CGAACATGCT GCCGGTGATC
GATTCCGACC TCGCGCTGAT GCGCGACATC GCGACGTGGA CCGAGCGCAT GTGGGCCGAC
GGCCGGCGCC TGAAGCCGCG CGAAGTCGTC GCCGAATTCG ACAAGTACCT GCACGACGAG
CTCGACCTGA TGCGCGAGGC CGCGAACGGC AGCCAGCTGC GCCGCAACTT CGCGGGCCTC
GACCTGCTGC TCGTGCCCGA GATGTTCTGG GATTTCTCGA CGTCGCAGGT CCTCGTGATG
GAGCGCATGA CCGGCGTGCC GATCAGCCAG GTCGAGACGC TGCGCACCGC GGGCGTCGAC
ATCAAGAAGC TCGCGCGCGA AGGCGTCGAG ATCTTCTTCA CGCAGGTGTT TCGCGACGGT
TTCTTCCATG CTGACATGCA CCCGGGCAAC ATCCAGGTGA GTCTCGACCC GAAGACCTTC
GGCCGCTATA TCGCGCTCGA TTTCGGGATC GTCGGCGCGT TGTCGGATTT CGACAAGAAC
TACCTCGCGC AGAACTTCCT CGCGTTCTTC AAGCGCGATT ACCACCGCGT CGCGACGCTG
CACCTCGAAT CGGGCTGGGT GCCGCCCGAG ACGCGCGTCG AGGAACTCGA AAGCGCGATC
CGTGCGGTGT GCGAGCCGTA TTTCGACCGC GCGCTGAAAG ACATCTCGCT CGGCCAGGTG
CTGATGCGCC TGTTCTCGAC GTCGCGCCGC TTCAACGTCG AGATCCAGCC GCAGCTCGTG
CTGTTGCAGA AGACGATGCT GAACGTCGAG GGGCTCGGCC GCTCGCTCGA TCCCGAACTC
GACCTGTGGA AGACCGCGAA GCCGTATCTC GAGCGCTGGA TGACCGAGCA GATCGGCCTG
CGCGGCTGGT ACGAGCGCTT CAAGGTCGAG GCGCCGCAGT GGAGCAAGAC GCTGCCGCAA
CTGCCGCGCC TGATCCATCA CGCGATGGCG GCGCGCCACG ATGCGCCGCG TGCGGCGAGC
GAAGACCTGA TGCGTCAGGT CCTCATCGAG CAGAAACGGA CCAACCGGTT GCTGCAGGCA
TTGCTGATCT TCGGTCTTGC CGTCGGCGTC GGGGCGCTCG TCGCGCGCGT GCTGCTCGCG
CTCGCGTACG GCGCGTGA
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| Protein sequence | MRIFRFIKIV YTVIRFGLDE VMLSRIDDRR VKLLLRITTI GRRYSDPPAV RLRHALESLG
PIFVKFGQVL STRRDLLSVD FANELAKLQD QVPPFDSAVA IAIIEKSLGA PVDELFDEFE
REPIASASIA QVHFGKLKQG VHAGKAVAVK VLRPNMLPVI DSDLALMRDI ATWTERMWAD
GRRLKPREVV AEFDKYLHDE LDLMREAANG SQLRRNFAGL DLLLVPEMFW DFSTSQVLVM
ERMTGVPISQ VETLRTAGVD IKKLAREGVE IFFTQVFRDG FFHADMHPGN IQVSLDPKTF
GRYIALDFGI VGALSDFDKN YLAQNFLAFF KRDYHRVATL HLESGWVPPE TRVEELESAI
RAVCEPYFDR ALKDISLGQV LMRLFSTSRR FNVEIQPQLV LLQKTMLNVE GLGRSLDPEL
DLWKTAKPYL ERWMTEQIGL RGWYERFKVE APQWSKTLPQ LPRLIHHAMA ARHDAPRAAS
EDLMRQVLIE QKRTNRLLQA LLIFGLAVGV GALVARVLLA LAYGA
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