Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2772 |
Symbol | |
ID | 4310346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3054367 |
End bp | 3056802 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638150611 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_774662 |
Protein GI | 115352823 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCAATT TCCTGATTCG CAAGGTCGCC GTGCTGGGCG CCGGCGTGAT GGGCGCGCAG ATCGCCGCGC ACCTCGTCAA CGCGCGCGTG CCGGTACTGT TGTTCGACCT GCCGGCCAAG GAAGGCCCGA AGAACGCGAT CGCGCTGAAG GCGATCGAGA ACCTGAAGAA GCTGTCGCCC GCGCCGTTCG GCGTGAAGGA CGACGCGAAA TACCTCGAAG CCGCGAACTA CGAGGACGAC ATCGCGAAGC TCGCCGAGTG CGACGTCGTG ATCGAGGCGA TCGCCGAGCG GATGGACTGG AAGCACGACC TGTACAAGAA GGTCGCGCCG CACATCGCAC CGAACGCGAT CTTCGCGACC AACACGTCGG GCCTGTCGAT CACGACGCTG TCCGAAGGTT TCTCGGACGA ACTGAAGTCG CGCTTCTGCG GCGTGCACTT CTTCAACCCG CCGCGCTACA TGCATCTGGT CGAGCTGATC CCGACCGCGC ATACGCGTGC CGACATCCTC GACCAGCTCG AAACGTTCCT GACGAGCATC GTCGGCAAGG GCGTCGTGCG CGCGAAGGAC ACGCCGAACT TCATCGCGAA CCGCGTCGGC ATCTTCTCGA TCCTCGCGGT GATCACCGAG GCCGCGAAGT TCGGCCTGCG CTTCGACGAA GTCGACGATC TGACTGGCAG CCGCCTCGGC CGCGCGAAGT CGGCGACGTT CCGCACTGCG GACGTGGTCG GCCTCGACAC GATGGCGCAC GTGATCAAGA CGATGCAGGA CAACCTCGCC GACGATCCGT TCTTCCCGGT CTACCAGACG CCTGCCGTGC TCGCCGAGCT GGTGAAGCAG GGCGCGCTCG GCCAGAAGAC GGGCGGCGGT TTCTACAAGA AGGAAGGCAA GGCGATCAAG GTGCTCGACG CGAAGACGGG CACCTATGTG GATGCGGGCG CGAAGGCGGA CGAAACCGTC GGCCGCATCC TGAAGCGCCC GCCGGCGGAA CGCCTGAAGC TGCTGCGCGA GACGGATCAT CCGCACGCGC AGTTCCTGTG GTCGATCTTC CGCGACGTAT TCCACTACAT CGGCGTGCAT CTCGAGTCGA TCGCCGACAA CGCGCGCGAC GTCGACCTCG CGATCCGCTG GGGCTTCGGC TGGAACGAAG GCCCGTTCGA AGGCTGGCAG GCCGCCGGCT GGAAGCAGGT CGCCGAGTGG GTGCAGGAAG ACATCGCGGC CGGCAAGGCG CTCGCGAACG TGCCGCTGCC GTCGTGGGTG CTCGAAGGCC CGGTCGCCGA GCAGGGCGGC GTGCACACGG CCGAAGGCTC GTGGGCGCCG GCGTCGAAGC GCTTCGTGCC GCGTTCCGAC CTGGCCGTCT ACGGCCGGCA GGTGTTCCGC GCGCCGCTGA TCGGCGAAAC CGGCGCCGAT CCCAAGTCGT ACGGCAAGAC GCTGTTCGAA ACCGACGCGG TGCGTGCGTG GGTCGACGAC CGTGCAGGTG AAGACGACGT CGTGATCGTG TCGTTCAAGT CGAAGATGAA CACGATCGGG CCGAGCGTGA TCGACGGCCT CGTGCAGGCG ATCGAACTCG CGGAGAAGGA CTACAAGGGC GTGGTGATCT GGCAGCCGAC GTCGCTGAAG CTCGGCACGC CGGGCGGCCC GTTCTCGGCC GGCGCGAACC TCGAAGAGGC GATGCCCGCG TTCATGATGG GCGGCGCGAA GGGCATCGAG CCGTTCGTGA AGAAGTTCCA GGAAGGCATG CTGCGCGTGA AGTACGCGAA CGTGCCGGTC GTCGCGGCCG TGTCGGGCAT CGCGCTCGGC GGCGGTTGCG AGCTGATGCT GCACAGCGCG AAGCGCGTGG TGCACGTCGA GAGCTACATC GGTCTCGTCG AAGTGGGCGT CGGCCTCGTG CCGGCGGGTG GCGGCCTGAA GGAAGCGGCG CTGCGCGCGG CGGAGGCGGC CACGGCCGCG AACGCGACCA CCGAGATCCT GAAGTTCGTC ACGAAGTCGT TCGAGAACGC GGCGATGGCG AAGGTGTCGT CGTCGGCGCA CGATGCGCGC GCGATGGGCT ACCTGAAGCC GTCCGACACG ATCGTCTTCA ACGTGTTCGA ACTGCTCGAC ACCGCGAAGA AGGAAGCGCG TGCGCTGGCC GACGTCGGCT ATCGCGCCCC GCTGCGCGCG AAGGACGTGC CGGTGGCGGG CCGCTCGGCG ATCGCGACGA TCAAGGCATC GCTCGTCAAC ATGCGTGACG GCCGCTTCAT CAGCGATCAC GACTACCTGA TCGCGAGCCG CATCGCCGAA GCCGTGTGCG GCGGCGACGT CGAAGCCGGC AGCCTCGTCG ACGAGCAGTG GCTGCTCGCG CTCGAGCGCC GCGCGTTCGT CGAGCTGCTC GGCACGCAGA AGACGCAGGA ACGGATCATG GGCATGTTGC AGACCGGCAA GCCGGTGCGT AACTGA
|
Protein sequence | MSNFLIRKVA VLGAGVMGAQ IAAHLVNARV PVLLFDLPAK EGPKNAIALK AIENLKKLSP APFGVKDDAK YLEAANYEDD IAKLAECDVV IEAIAERMDW KHDLYKKVAP HIAPNAIFAT NTSGLSITTL SEGFSDELKS RFCGVHFFNP PRYMHLVELI PTAHTRADIL DQLETFLTSI VGKGVVRAKD TPNFIANRVG IFSILAVITE AAKFGLRFDE VDDLTGSRLG RAKSATFRTA DVVGLDTMAH VIKTMQDNLA DDPFFPVYQT PAVLAELVKQ GALGQKTGGG FYKKEGKAIK VLDAKTGTYV DAGAKADETV GRILKRPPAE RLKLLRETDH PHAQFLWSIF RDVFHYIGVH LESIADNARD VDLAIRWGFG WNEGPFEGWQ AAGWKQVAEW VQEDIAAGKA LANVPLPSWV LEGPVAEQGG VHTAEGSWAP ASKRFVPRSD LAVYGRQVFR APLIGETGAD PKSYGKTLFE TDAVRAWVDD RAGEDDVVIV SFKSKMNTIG PSVIDGLVQA IELAEKDYKG VVIWQPTSLK LGTPGGPFSA GANLEEAMPA FMMGGAKGIE PFVKKFQEGM LRVKYANVPV VAAVSGIALG GGCELMLHSA KRVVHVESYI GLVEVGVGLV PAGGGLKEAA LRAAEAATAA NATTEILKFV TKSFENAAMA KVSSSAHDAR AMGYLKPSDT IVFNVFELLD TAKKEARALA DVGYRAPLRA KDVPVAGRSA IATIKASLVN MRDGRFISDH DYLIASRIAE AVCGGDVEAG SLVDEQWLLA LERRAFVELL GTQKTQERIM GMLQTGKPVR N
|
| |