| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2708 |
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| Symbol | |
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| ID | 4310404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2982395 |
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| End bp | 2983597 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150547 |
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| Product | porin |
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| Protein accession | YP_774598 |
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| Protein GI | 115352759 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA AGCTGTTGGC CGGCGCGGGT GTCGCGCTGA TCGCGGGTGC GGCGCACGCC
CAGAGCAGCG TCACGCTGTA CGGGATTATC GATGAAGGGC TGACCTATGC GAGCAACATC
GCGACGCCCG GCCCGCACGG CGCGGTGAGC GGCAAGCCCG CGTTGCGAAT GCTCGGCGGC
GTGCAGCAGG CGAGCCGTTG GGGGCTGCGC GGCAGCGAGG ATCTCGGCGG GGGGCTGGCC
GCGGTCTTCA CGCTCGAGAA CGGTTTCGAT CCGAGCACCG GCAGGCTCGG GCAGGGCGGG
CTGATGTTCG GCAAGAAGGC GTTCGTCGGG CTGTCGGGGC CGTTCGGCAC CGTCACGCTC
GGGCGGCAGT ACGACACCAA CGTCGACATC CTCGGGCCGC TCGAGGCCGC CGCGCTGTTC
GGCGGCTACA TGGTCGCGCA TCCCGGCGAC CTCGACAACG TGAACAACGC GAACTCGACC
AACAACGCGA TCAAGTTCAC CAGTAAAGAC TACGGCGGGG CTCGCGTCGC GGCGATGTAT
GGGGTGGGCG GCGTCGCCGG CGCGGCGACG CGCAATCAGG TGTGGTCGGC AACAGTTGCC
TACACGCGCG GGCCGCTTGC GGTGGCGGCC GGCTATCTGA ATGCGCGCAA TCCGAACGTG
TCGTTCTTCG GCACGACCGG CAGCCCCGCG CCGAGCGTCG GCGGCGTGCC GGGCAGCAAC
ATGCTGTCGC CGGTGTATTC CGGCTATGCA TCCGCGCGCA CGCTGCAGGT CGCGGTGGTG
GGCGGCACCT ATGCGATCGG CGCGATGACG CTTGGCGCGA TGTATACGAA CACGTCGTTC
CGTCAGCTCG GCGACCTGTC GTCCGGGCCG AACCCGGGCG GCGTGTCCGG CAACGCGGTG
TTCAACAACG CGGAGGCGAG CGTGCGCTAC CAGTTCATGA CCTCGCTGTT CGGCGGCGTG
GCGTACGACT ACACGCGCGG CGGCGGCGTG AACGGCCGCG ACGGCGCGAC GTATCACCAG
GTCGCGGCGG GGCTCGACTA TTTCCTGTCG AAGCGCACCG ACGTCTACGT GAGCGCCGTC
TATCAGCGCG CATCGGGCAC CGACTCGACG GGGCATCTGG CCGTCGCGGC GATCAACGGG
CCCGGTGCAT CCGCGAACGA TCGGCAGCTG CAGGCGCGCG TCGGCATGCG GCACAAGTTC
TGA
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| Protein sequence | MKKKLLAGAG VALIAGAAHA QSSVTLYGII DEGLTYASNI ATPGPHGAVS GKPALRMLGG
VQQASRWGLR GSEDLGGGLA AVFTLENGFD PSTGRLGQGG LMFGKKAFVG LSGPFGTVTL
GRQYDTNVDI LGPLEAAALF GGYMVAHPGD LDNVNNANST NNAIKFTSKD YGGARVAAMY
GVGGVAGAAT RNQVWSATVA YTRGPLAVAA GYLNARNPNV SFFGTTGSPA PSVGGVPGSN
MLSPVYSGYA SARTLQVAVV GGTYAIGAMT LGAMYTNTSF RQLGDLSSGP NPGGVSGNAV
FNNAEASVRY QFMTSLFGGV AYDYTRGGGV NGRDGATYHQ VAAGLDYFLS KRTDVYVSAV
YQRASGTDST GHLAVAAING PGASANDRQL QARVGMRHKF
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