| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2702 |
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| Symbol | |
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| ID | 4310048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2976681 |
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| End bp | 2978339 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638150540 |
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| Product | major facilitator transporter |
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| Protein accession | YP_774592 |
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| Protein GI | 115352753 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00241693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCT TAGGCGGGCA AATTTCGCAC TCGCCGATGA CGGCCGAAGA AAAGAAGGTA
ATCTTCGCGT CGTCGCTCGG CACCGTGTTC GAGTGGTACG ACTTTTACCT GGCCGGGTCA
CTCGCGGCCT ACATCAGCAA GAGCTTCTTC TCCGGGGTCA ATCCGACCGC CGCCTTCATC
TTCACGCTGC TCGGCTTCGC GGCCGGCTTC GCCGTGCGAC CGTTCGGCGC GATCGTGTTC
GGCCGGCTCG GCGACCTCGT CGGCCGCAAG CACACGTTCC TCGTGACGAT CGTGATCATG
GGCATCTCGA CCTTCGTGGT CGGCTTCCTG CCCGGCTACA CGACGATCGG CATCGCGGCG
CCCGTGATCT TCATCGCGAT GCGGCTGCTG CAGGGCCTCG CGCTCGGCGG CGAGTACGGC
GGCGCGGCGA CCTACGTCGC CGAGCATGCA CCGGCGAACC GGCGCGGCTT CTACACCGCG
TGGATCCAGA CGACCGCGAC GCTCGGCCTG TTCCTGTCGC TGCTCGTGAT CCTCGGCGTG
CGCACGCTCA TCGGCGAGGA ATCGTTCGGC AACTGGGGCT GGCGCGTGCC GTTCGTCGCG
TCGATCCTGC TGCTCGCGGT GTCGGTGTGG ATCCGGTTGC AGCTGAACGA ATCGCCGGTG
TTCCTGCGCA TCAAGGCCGA GGGCAAGACG TCGAAGGCGC CGCTGACCGA AGCGTTCGGC
CAGTGGAAGA ACCTGAAGAT CGTGATCCTC GCGCTCGTCG GCCTGACCGC CGGCCAGGCC
GTCGTCTGGT ACACGGGCCA GTTCTACGCG CTGTTCTTCC TCACGCAGAC GCTGAAGGTC
GACGGTGCCA GCGCGAACAT CCTGATCGCG ATCGCGCTCC TGATCGGTAC GCCGTTCTTC
CTGTTCTTCG GCTCGCTGTC GGACCGGATC GGCCGCAAGC CGATCATCCT CGCCGGCTGC
CTGATCGCGG CGCTCACCTA CTTCCCGCTG TTCAAGGCGC TCACGCACTA CGCGAACCCG
CAGCTCGAAC TCGCGACGCA GAAGGCACCG ATCTCGGTCA TCGCCGATCC GGCCACCTGC
TCGTTCCAGT TCAACCCGGT GGGCACGTCG AAGTTCACGA GCTCGTGCGA CATCGTGAAG
AGCGCGCTCG CAAAGGCCGG CCTGAACTAC GAGAACGTCG CGGCGCCGGC AGGCTCGACC
GCGCAGATCA AGGTGGGCGA CACGGTGATC CCGGCCTATG ACGGCAAGGC GCCCGATGCG
AAGGCGCAGG GCGCGGCGTT TGACAAGACG CTCGCGTCGA CGCTGAAGGG CGCCGGCTAT
CCGGCCAAGG CCGACCCGGC GCAGCTCAAC TGGCCGATGA CGATCGTGAT ACTGACGATC
CTCGTGATCT ATGTGACGAT GGTCTACGGC CCGATCGCCG CGATGCTGGT CGAGATGTTC
CCGACGCGGA TCCGCTATAC GTCGATGTCG CTGCCCTATC ACATCGGCAA CGGCTGGTTC
GGCGGCTTCC TGCCGGCGAC CGCGTTCGCG ATCGTCGCGG CGAAGGGCAA CATCTATTCG
GGGCTCTGGT ATCCGATCGT GATCGCGCTG GCCACGTTCG TGATCGGTCT GCTGTTCGTC
AAGGAGACGA AGGACTCGAA CATCTACGCG CAGGATTGA
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| Protein sequence | MATLGGQISH SPMTAEEKKV IFASSLGTVF EWYDFYLAGS LAAYISKSFF SGVNPTAAFI
FTLLGFAAGF AVRPFGAIVF GRLGDLVGRK HTFLVTIVIM GISTFVVGFL PGYTTIGIAA
PVIFIAMRLL QGLALGGEYG GAATYVAEHA PANRRGFYTA WIQTTATLGL FLSLLVILGV
RTLIGEESFG NWGWRVPFVA SILLLAVSVW IRLQLNESPV FLRIKAEGKT SKAPLTEAFG
QWKNLKIVIL ALVGLTAGQA VVWYTGQFYA LFFLTQTLKV DGASANILIA IALLIGTPFF
LFFGSLSDRI GRKPIILAGC LIAALTYFPL FKALTHYANP QLELATQKAP ISVIADPATC
SFQFNPVGTS KFTSSCDIVK SALAKAGLNY ENVAAPAGST AQIKVGDTVI PAYDGKAPDA
KAQGAAFDKT LASTLKGAGY PAKADPAQLN WPMTIVILTI LVIYVTMVYG PIAAMLVEMF
PTRIRYTSMS LPYHIGNGWF GGFLPATAFA IVAAKGNIYS GLWYPIVIAL ATFVIGLLFV
KETKDSNIYA QD
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