Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2666 |
Symbol | |
ID | 4310012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2936201 |
End bp | 2937817 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638150504 |
Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
Protein accession | YP_774556 |
Protein GI | 115352717 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCACTT GTCTCTACAA TGTGCGCTCC GGCGCGCCGC GCGCCCCGCC CGAACCCCTG CATTTCCCGT ATTCGCCCAT GCCGATTTCC GATCTCTCCG CCCGGTTCGC CCCCCGCGCC CGCGCCCGCG TCTGCCTGCG GGCGGCCGCC GTCGTCGCCA CCTGCACGGC CCTTGCGTTC GCACCTTCCG CGCAGGCCCG CAAGAAGCTT CACAAGGAAG CGCGCAAGAC CGCCGTCGTG TCGCCCGCCG CGCGCGCGGC CGGCCTGCCG GCGTCCGTGC TGGTCGCGCT GCAGCGCGCG AAGGTGCCGG CATCGGCGAT GAGCGTCGTC GTCGAGCGCG TCGGCGATCC CGAGCCGCTG ATCGAATGGA ACGCGAACCG GCCGATGCTG CCGGCGTCGA CGATGAAGCT CGTCACGACC TTCTCGGGCC TGTCGATCCT CGGCCCCGAC TTCCGCTGGC GCACCACCGC GTATGCGGAC GGCCCGGTCG ATCCGGACGG CACGCTGCAA GGCAACCTGT ACATCAAGGG CACCGGCGAT CCGAAGCTCG TGCCCGAGGA GCTGATCGAC CTCGTCGACA AGCTCCGCAA GGCGGGCGTC AAGCGCGTGG CCGGCGGCCT CGTGCTCGAC AAGAGCTATT TCGCCGCGTC GACGCGCGAC CTGCCGTCGT TCGACGACGA CGTGAGCGCA CCGTACAACG TCGGCCCCGA TCCGCTGCTG TACGCGTTCA AGGCCGTGTC GTTCACGGTG ACGCCGGGCG ACGACGGCAA GATCGCCGTC GATGTGCTGC CGCCGCTCGC CAATCTGTCG ATCGACAACC AGCTGTACGA AGGCAGCGGA TCGTGCGGCG CGGCCGCCGC GGCCGCGCGT CCGACGCTGA CGGCCGGCAG CGGGATCATG ACCGCGTCGT TCGCCGGCGA CTATCCGCTG CGCTGCGGCG CGCGCACGAC CAATCTCGCG ATCCTCGATC ACACGACGTT CTTCGCGCGC GGCTTCCTCG CGCTGTGGCA GCAGGACGGC GGCACGATCG CGGGCCCGGT CAGCGAAGGC AAGGTGCCCA CCACCGCGCG CCCGCTCGCC GTCCATCACA GCCCGGTGCT CGGCAGCATC GTCTACGACA TCAACAAGTT CAGCAACAAC GTGATGGCGC GCAACCTGTT CCTGACGATC GGCGCGGTCG CCGGCAAGCC GCCTGCGACA CCCGAGCAGT CGAGCCGCGC GATTCAGGCA TTCCTGCGCA AGAGCGGGAT CGCGATGCCC GACCTCGCGC TCGAGAACGG CTCGGGCCTG TCGCGCGACG AGCACGTGAG CGCGCTGTCG CTCGCCGCGC TGCTGCAGGC CGCGAACGCG AGCCCGGTCG CGCAGGCGTT CGTCGATTCG CTGCCGGTCG CCGGCATCGA CGGCACGATG AAGAACCGCC TGACCAACGC CGGCGTGCTC GGCAATGCGC ACATCAAGAC GGGCACGCTG CGCGACGTGC GCGCGATCGC GGGCTACGTC GCGGGCGCGG ACGGCCAGAG CTACGTCGTC GTCAGTTTCA TCAACGACGA TCACGCGGAA GCCGCGCGCG CCGCGCACGA CACGCTGCTC GAATGGATCT ACGCGGGCGC GCACTGA
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Protein sequence | MRTCLYNVRS GAPRAPPEPL HFPYSPMPIS DLSARFAPRA RARVCLRAAA VVATCTALAF APSAQARKKL HKEARKTAVV SPAARAAGLP ASVLVALQRA KVPASAMSVV VERVGDPEPL IEWNANRPML PASTMKLVTT FSGLSILGPD FRWRTTAYAD GPVDPDGTLQ GNLYIKGTGD PKLVPEELID LVDKLRKAGV KRVAGGLVLD KSYFAASTRD LPSFDDDVSA PYNVGPDPLL YAFKAVSFTV TPGDDGKIAV DVLPPLANLS IDNQLYEGSG SCGAAAAAAR PTLTAGSGIM TASFAGDYPL RCGARTTNLA ILDHTTFFAR GFLALWQQDG GTIAGPVSEG KVPTTARPLA VHHSPVLGSI VYDINKFSNN VMARNLFLTI GAVAGKPPAT PEQSSRAIQA FLRKSGIAMP DLALENGSGL SRDEHVSALS LAALLQAANA SPVAQAFVDS LPVAGIDGTM KNRLTNAGVL GNAHIKTGTL RDVRAIAGYV AGADGQSYVV VSFINDDHAE AARAAHDTLL EWIYAGAH
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