| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2656 |
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| Symbol | |
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| ID | 4310002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2926392 |
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| End bp | 2927690 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150494 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_774546 |
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| Protein GI | 115352707 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.444245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCG AACGGGTTCC ATACCGCTTG ATCACTGTCG CGGCAGCCGC GGTTTTCCTG
GCTGCCTGCG GAAAAAAAGA ATCGGCACCG CCGCCGCAAA CGCCGGAAGT CGGTGTCGTC
ACCGTCCAGC CGCAAGCCGT CCCGGTCTTC ACCGAACTGC CGGGCCGCAC CAGCGCCTTC
CTCGTCGCGC AAGTGCGCGC ACGGGTCGAC GGCATCGTGC TGCGCCGTGA ATTCACCGAA
GGCGGCGACG TCAAGGCCGG CCAGCGCCTC TACAAGATCG ACCCGGCACC GTACATCGCT
CAACTGAACA GCGCGAAGGC GACGCTCGCG AAGGCGCAGG CGAACCTCGT CACGCAGAAC
GCGCTCGTCG CGCGCTACAA GGTGCTGGTG GCCGCAAACG CGGTCAGCAA GCAGGAATAC
GACAACGCGG TGGCCACGCA AGGTCAGGCC GCGGCGGACG TCGCGGCCGG CAAGGCAGCG
GTGGATACCG CGCAGATCAA CCTCGGCTAT ACGGACGTCG TGTCGCCGAT CACCGGCCGC
GTCGGCATTT CGCAGGTCAC GCCGGGCGCC TACGTGCAGG CGAGCCAGGC GACGCTGATG
TCGACGGTGC AGCAGCTCGA TCCGGTCTAT GTCGACCTGA CGCAGTCGAG CCTCGAGGGG
CTGAAGCTGC GCCAGGACGT GCAGAGCGGC CGCCTGAAGA CGAGCGGGCC GGGCGCGGCG
AAGGTGTCGC TGATCCTGGA AGACGGCAAG ACCTATTCCG ACGCCGGCAA GCTGCAGTTC
TCCGACGTGA CGGTCGACCA GACGACGGGC TCGGTGACGA TCCGCGCGGT GTTCCCGAAC
CCGGGCCGCG TGCTGCTGCC GGGGATGTTC GTGCGCGCAC GGATCGAGGA AGGCGTGAAC
GAGAACGCGT ACCTGGTGCC GCAGATCGGC GTCACGCATG ACGCGAAGGG CCAGCCGGTC
GCATTGGTGG TGAACGCGAG CAACAAGGTC GAGCCGCGTC CGCTGAAGAC GACCGGCATG
CAAGGTCAGA ACTGGATCGT CGAAGGCGGC CTGCAAGCGG GCGACCGCGT GATCGTGCAG
GGCGTCGAGA AGGTTCGTCC GGGCGCGACG GTGAAGTCGG TCGCCGCGCA GTTGCCGGCC
GCCGACGCCG CATCGGGTGC AGCCGCATCC ACCGCGCCGG CCGCTGCCGC CTCGGGCGCC
GCTGCGTCGG GTGCTGGTGC GTCGGGCGCT GCCGCGTCGG GTGCCGCCGC CTCGGGTGCA
GCGCCGGCGA GCGCCGCCGC CGCTTCGAGC GCGAAATAA
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| Protein sequence | MRVERVPYRL ITVAAAAVFL AACGKKESAP PPQTPEVGVV TVQPQAVPVF TELPGRTSAF
LVAQVRARVD GIVLRREFTE GGDVKAGQRL YKIDPAPYIA QLNSAKATLA KAQANLVTQN
ALVARYKVLV AANAVSKQEY DNAVATQGQA AADVAAGKAA VDTAQINLGY TDVVSPITGR
VGISQVTPGA YVQASQATLM STVQQLDPVY VDLTQSSLEG LKLRQDVQSG RLKTSGPGAA
KVSLILEDGK TYSDAGKLQF SDVTVDQTTG SVTIRAVFPN PGRVLLPGMF VRARIEEGVN
ENAYLVPQIG VTHDAKGQPV ALVVNASNKV EPRPLKTTGM QGQNWIVEGG LQAGDRVIVQ
GVEKVRPGAT VKSVAAQLPA ADAASGAAAS TAPAAAASGA AASGAGASGA AASGAAASGA
APASAAAASS AK
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