Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2584 |
Symbol | |
ID | 4308919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2846915 |
End bp | 2848384 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638150422 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_774474 |
Protein GI | 115352635 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0492879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCTG TCCCGCGCCC CCGGTCCGCC CCCATGTTCC AACCCCCGCC CGCCGCCGCT CCCGGCGAAA AGAACCTCAC CGTGATGCTG TGGCTCGTCG CGACGGGCTT CTTCATGCAG ACGCTCGATG CGACGATCGT CAACACGGCG CTGCCGTCGA TGGCCGTGAG TCTCGGCGAA TCGCCGCTCC GGATGCAGTC GGTCGTGATC GCGTACTCGC TGACGATGGC GGTGATGATT CCCGTTTCCG GCTGGCTCGC GGACACGTTC GGCACGCGGC GCGTGTTCTT CAGCGCGATC CTGGTGTTCT CGCTCGGCTC GCTGCTGTGC GCGAACGCGC ATACGCTGCA GCAGCTCGTC GTGTTCCGCG TCGTGCAGGG GGTGGGCGGC GCGATGCTGC TGCCGGTCGG GCGGCTCGCC GTGCTGCGCA CGTTCCCGGC CGAACGCTAC CTGAGCGCGC TGTCGTTCGT CGCGATTCCC GGGCTGATCG GGCCGCTGAT CGGGCCGACG CTCGGCGGCT GGCTCGTGAA GATCGCGTCG TGGCACTGGA TCTTCCTGAT CAACGTGCCG GTCGGCGTCG CCGGCTGCAT CGCGACCTTC TACTCGATGC CCGACTCGCG CAACCCGGCC GTCGGCCGCT TCGACCTGAA GGGCTATCTG CTGCTGACGA TCGGGATGGT CGCGATCTCG CTGTCGCTCG ACGGGCTCGC CGATCTCGGC ATGCAGCACG CGGCCGTGCT GGTACTGCTG ATCCTGAGCC TCGCATGCTT CGTCGCGTAC GGACTGTACG CGGTGCGCGC GCCGCTGCCG ATCTTCTCGC TCGAGCTGTT CAAGATCCAT ACGTTCAGCG TCGGCCTGCT CGGCAACCTG TTCGCGCGGA TCGGCAGCGG CGCGATGCCG TACCTGATCC CGCTGCTGCT GCAGGTGAGC CTCGGCTATT CGGCGTTCGA GGCCGGGCTG ATGATGCTGC CGGTCGCGGC GGCGGGGATG TTCTCGAAGC GGATCATCAC GCAGCTGATC ACGCGGCACG GCTACCGCAA GGTGCTGCTC GTGAACACGA TCATGGTGGG CGTGATGATG GCGAGCTTCG CGCTGATGCG CGACACGGTG CCCGTCTGGG TGAAGGTCGT GCACCTCGCG CTGTTCGGCG GCTTCAACTC GATGCAGTTC ACCGCGATGA ACACGCTGAC GCTGAAGGAT CTCGGCACCG GCGGCGCGAG CAGCGGCAAC AGCCTGTTCT CGCTCGTGCA GATGCTGTCG ATGAGCCTTG GCGTCACCGT CGCCGGTGCG CTGCTCGCGA CCTTCACCGG GATGCTGCGC ACGGTGACGC CGAGCAATAC GCTGCCCGCG TTCCATGCGA CCTTCATCTG CGTGGGGATC ATCACGGCCG CGTCGGCGTG GATCTTCGCG CAACTCGCCC CCGAAATCCG CGGCCGCGCG CAGAAGACCG ACCCGTCCGA ACGCGCGTGA
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Protein sequence | MAAVPRPRSA PMFQPPPAAA PGEKNLTVML WLVATGFFMQ TLDATIVNTA LPSMAVSLGE SPLRMQSVVI AYSLTMAVMI PVSGWLADTF GTRRVFFSAI LVFSLGSLLC ANAHTLQQLV VFRVVQGVGG AMLLPVGRLA VLRTFPAERY LSALSFVAIP GLIGPLIGPT LGGWLVKIAS WHWIFLINVP VGVAGCIATF YSMPDSRNPA VGRFDLKGYL LLTIGMVAIS LSLDGLADLG MQHAAVLVLL ILSLACFVAY GLYAVRAPLP IFSLELFKIH TFSVGLLGNL FARIGSGAMP YLIPLLLQVS LGYSAFEAGL MMLPVAAAGM FSKRIITQLI TRHGYRKVLL VNTIMVGVMM ASFALMRDTV PVWVKVVHLA LFGGFNSMQF TAMNTLTLKD LGTGGASSGN SLFSLVQMLS MSLGVTVAGA LLATFTGMLR TVTPSNTLPA FHATFICVGI ITAASAWIFA QLAPEIRGRA QKTDPSERA
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