Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2564 |
Symbol | |
ID | 4308899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2821996 |
End bp | 2822832 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638150402 |
Product | integrase catalytic subunit |
Protein accession | YP_774454 |
Protein GI | 115352615 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.95917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCACGAGC TTAGGCAGCA CCATCCGGTA GCGGCACTTC TGAAGGCGGC CGGCTTGGCG CGTAGCACGT TCTATTACCA GCTTGGGACG CTGAGCGTCG ACGATCGCCG TGCCGATCTC AAGGCGAAGA TCCGGGCGGT GTTCGACCAT CACAAGGGCC GCTACGGCTA TCGACGCGTC ACGGCTGCGA TTCGGCAAAC CGGGCATCTC GTCAACCACA AGGCCGTGCA GAGGCTGATG CAGCAATTGC AGTTGAAATC CCTGCTGCGC CCGAAGAAAT ACCGCTCCTG GCGAGGCGAA GTCGGCAAAG CCGCACCCAA CCTGCTGCAA CGTCAGTTTA GTGCCGCACA GGCCAATCAG AAGTGGGTGA CGGATGTGAC GGAATTCAAC GTCGGCGGTC AGAAGCTGTA CCTGTCGCCG GTGATGGATC TGTACAACGG CGAGATCGTG GCTTACCAGA TGGATCGACG CCCAAGCTTC GAGTTGGTCA GCGGCATGCT CAAGAAGGCG CTGACCAAAC TCAAACGCAC GGACAGACCG CTATTGCATT CGGACCAAGG CTGGCAATAC CGAATGCCGG CGTTTCGCCG GCAACTGAAG CGGCGCAAAC TGACTCAAAG CATGTCCCGC AAGGGGAACT GCCTCGATAA TGCTGCGATG GAAAGCTTCT TCGGCACGCT CAAGTCCGAG TGCTACAAGG GACATCGCTT CACTTGCGTG GAGCATTTGC GCGACACGCT CAATCACTAC ATCCACTACT ACAACCACGA ACGCATCAAG CTCAAATTGA AAGGGCTGAG TCCCGTGCAA TACAGAACTC AGCCCTTGAG CGCCTAG
|
Protein sequence | MHELRQHHPV AALLKAAGLA RSTFYYQLGT LSVDDRRADL KAKIRAVFDH HKGRYGYRRV TAAIRQTGHL VNHKAVQRLM QQLQLKSLLR PKKYRSWRGE VGKAAPNLLQ RQFSAAQANQ KWVTDVTEFN VGGQKLYLSP VMDLYNGEIV AYQMDRRPSF ELVSGMLKKA LTKLKRTDRP LLHSDQGWQY RMPAFRRQLK RRKLTQSMSR KGNCLDNAAM ESFFGTLKSE CYKGHRFTCV EHLRDTLNHY IHYYNHERIK LKLKGLSPVQ YRTQPLSA
|
| |