| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2468 |
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| Symbol | hemC |
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| ID | 4308855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2719285 |
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| End bp | 2720271 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150305 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_774358 |
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| Protein GI | 115352519 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCCG AGACTATTTC GGCACAAGCC CCTGCGACGC TGACGATTGC TTCGCGCGAG
AGTCGCCTGG CGATGTGGCA AGCCGAACAT GTGCGTGATG CGCTGCGCAA ATTATATCCA
GCTTGCGACG TGAAAATCCT CGGGATGACG ACCCGTGGCG ACCAGATTCT CGATCGTACG
CTGTCGAAGG TCGGCGGCAA GGGCCTGTTC GTGAAGGAGC TGGAGAACGC GCTCGCCGAC
GGTCGCGCCG ATTTGGCCGT GCATTCGCTG AAGGACGTGC CGATGGCGCT GCCCGACGGC
TTCGCGCTCA CCGCGATCAT GGAGCGCGAG GATCCGCGCG ATGCGTTCGT GTCGAACGAC
TACGCGTCGC TCGACGCGCT GCCGGCCGGC GCCGTCGTCG GCACGTCGAG CCTGCGCCGC
GAGGCGATGC TGCGCGCGCG CTATCCGCAC CTCGACGTGC TGCCGCTGCG CGGCAACCTC
GACACGCGCC TGGCGAAGCT CGATCGCGGC GACTATGCGG CGATCATTCT CGCGGCCGCG
GGCCTGAAGC GCCTCGGCCT CGAAGCGCGA ATCCGTACAC TGATCGACGT CGAGGACAGC
CCGCCCGCCG CCGGTCAGGG CGCGCTCGGC ATCGAAATCG CCACGCACCG CACGGACGTC
GCCGCATGGC TCGCGCCGCT GCACGACCCG CGGACCGCGC TCGCGGTCGA GGCCGAGCGG
ATGGTGTCGC GCGCACTCGG CGGCAGCTGC GAGGTGCCGC TCGCCGCGCA CGCGGTGTGG
CGCGCCGGCG AGCTGTACCT GACGGGCCGC GTGTCGACGA CCGACGGCCA GCGCGTGCTG
ACGGCCGAGG AGTGCGGCGC GGTCATGACC GTCGCCGATG CGCTCGCGCT CGGCCGCGCG
GTGTCCGACG AGCTCGAGGC GCAGGGCGCG CTCGACATCG TCAACGCACT GCTCGCCGCG
TCGCAGGCCG GCAAGGGCGA CGCCTGA
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| Protein sequence | MNSETISAQA PATLTIASRE SRLAMWQAEH VRDALRKLYP ACDVKILGMT TRGDQILDRT
LSKVGGKGLF VKELENALAD GRADLAVHSL KDVPMALPDG FALTAIMERE DPRDAFVSND
YASLDALPAG AVVGTSSLRR EAMLRARYPH LDVLPLRGNL DTRLAKLDRG DYAAIILAAA
GLKRLGLEAR IRTLIDVEDS PPAAGQGALG IEIATHRTDV AAWLAPLHDP RTALAVEAER
MVSRALGGSC EVPLAAHAVW RAGELYLTGR VSTTDGQRVL TAEECGAVMT VADALALGRA
VSDELEAQGA LDIVNALLAA SQAGKGDA
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