Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2396 |
Symbol | |
ID | 4309516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2643653 |
End bp | 2645635 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638150230 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_774286 |
Protein GI | 115352447 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACGA AGAAGCCCAG CGCGGCCTAT AGCGAAGCAT CGATCAAGGT GCTCAAGGGT CTCGAGCCGG TCAAGCAGCG GCCCGGCATG TACACCCGTA CCGAAAATCC GCTGCACATC ATTCAGGAAG TCATCGACAA CGCGTCCGAC GAGGCGCTCG GCGGCTACGG CAAGCAGATC ATCGTCACGC TGCACACCGA CCAGTCGGTA TCGGTCGAGG ACGACGGCCG CGGCATCCCG TTCGGCATGC ACCCCGAGGA AGGCGTGCCG GTCGTCGAGA TCGTGTTCAC GCGCCTGCAC GCGGGCGGCA AGTTCGACAA GGCCGCCGGC GGCGCGTACA CGTTCTCGGG CGGCCTGCAC GGCGTCGGCG TGTCGGTCAC GAACGCACTG GCGACGCGCC TCGACGTGAC GGTCTGGCGC GACGGCAAGA TCGCCGAACT CGGCTTCGCC GACGGCGATG TCGTGAAGCC GCTCGCGACG CAAGGCGCGG GCCGCGGCGA GAAGAAATCC GGCACGCGCG TGCAGGTATG GCCGAATCCG AAGTACTTCG ATTCGCCGAA CCTGCCGCTC GGCGAGCTGC AGCGCCTGCT GCGCTCGAAG GCCGTGCTGC TGCCGGGCGT CGAGGTCGTG CTCGTCAACG AGAAGACCGG CGAACGCCAG ACCTGGAAAT ACGAGGACGG CCTGCGCGGC TACCTGCTCG ACGAGATGAA CGGCAGCGAG CTGCTGATCC CGCTGTTCGA GGGCGAGCGC TTCGCCGATG CGCGTTCGAC CGACGAAACC TTCGCCGAAG GCGAGGGCGC GTCGTGGGTC GTCGCATGGA GCGAGGAAGG TTCGCTGGTG CGCGAGTCGT ACGTGAACCT GATCCCGACG CCGGCCGGCG GCACGCACGA GTCGGGCCTG CGCGACGGTC TCTACCAGGC GGTGAAAAGC TTCGTCGAAC TGCACAACCT GCAGCCGAAG GGCGTGAAGC TGCTCGCGGA AGACGTGTTC GCACGCGTGT CGTTCGTGCT GTCCGCGAAG GTGCTCGACC CGCAGTTTCA AGGGCAGATC AAGGAGCGCC TGAACAGCCG CGACGCGGTG AAGCTCGTGT CGTCGTTCTC GCGGCCGGCG CTCGAGCTGT GGCTGAACCA GCACGTCGAG CACGGCAAGA AGCTCGCCGA ACTCGTGATC AAGCAGGCGC AGGCGCGCAC GCGCGCGGGC CAGAAGGTCG AGAAGCGCAA GAGCTCGGGC GTCGCGGTGC TGCCCGGCAA GCTGACCGAT TGCGAGACGG AAGATATCGC GCGCAACGAA TTGTTCCTCG TCGAGGGCGA CTCGGCGGGC GGTTCCGCCA AGATGGGCCG CGACAAGGAA TACCAGGCGA TCCTGCCGCT GCGCGGCAAG GTGCTGAATA CGTGGGAAAC CGAGCGCGAC CGCCTCTTCG CGAACAACGA GGTGCATGAC ATCTCGGTCG CGATCGGCGT CGATCCGCAC AGCCCGGACG AAACCGTCGA TCTGTCGAAC CTGCGCTACG GCAAGATCTG CATCCTGTCG GACGCGGACG TCGACGGCTC GCACATCCAG GTGCTGCTGC TCACGCTGTT CTTCAAGCAC TTCCCGCAGC TGATCGAACG CGGCCACGTG CATGTCGCGC GGCCGCCGCT GTTCCGCGTC GATGCGCCCG CGCGCGGCAA GAAGCCCGCG CAGAAGCTCT ATGCGCTCGA CGAAGGCGAA CTCGAGGCGA CGCTCGACAA GCTGCGCAAG GACGGCGTGC GTGAAACCCA ATGGAGCATC AGCCGCTTCA AGGGGCTCGG CGAAATGAGC GCGGAGCAGC TGTGGGACAC CACGATGAAC CCCGACACGC GCCGCCTGAT GCCGGTGAAG CTCGGCGAGC TCGACTACGA GTCGACCGTC GCGCGGATGA CGATGCTGAT GGGCAAGGGC GAGGCAGCCG CGCGGCGCGG CTGGCTCGAG GAAAAGGGCA ACGACGTCGA AGCGGACATC TAA
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Protein sequence | MSTKKPSAAY SEASIKVLKG LEPVKQRPGM YTRTENPLHI IQEVIDNASD EALGGYGKQI IVTLHTDQSV SVEDDGRGIP FGMHPEEGVP VVEIVFTRLH AGGKFDKAAG GAYTFSGGLH GVGVSVTNAL ATRLDVTVWR DGKIAELGFA DGDVVKPLAT QGAGRGEKKS GTRVQVWPNP KYFDSPNLPL GELQRLLRSK AVLLPGVEVV LVNEKTGERQ TWKYEDGLRG YLLDEMNGSE LLIPLFEGER FADARSTDET FAEGEGASWV VAWSEEGSLV RESYVNLIPT PAGGTHESGL RDGLYQAVKS FVELHNLQPK GVKLLAEDVF ARVSFVLSAK VLDPQFQGQI KERLNSRDAV KLVSSFSRPA LELWLNQHVE HGKKLAELVI KQAQARTRAG QKVEKRKSSG VAVLPGKLTD CETEDIARNE LFLVEGDSAG GSAKMGRDKE YQAILPLRGK VLNTWETERD RLFANNEVHD ISVAIGVDPH SPDETVDLSN LRYGKICILS DADVDGSHIQ VLLLTLFFKH FPQLIERGHV HVARPPLFRV DAPARGKKPA QKLYALDEGE LEATLDKLRK DGVRETQWSI SRFKGLGEMS AEQLWDTTMN PDTRRLMPVK LGELDYESTV ARMTMLMGKG EAAARRGWLE EKGNDVEADI
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