Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2395 |
Symbol | |
ID | 4309515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2641270 |
End bp | 2643591 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638150229 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_774285 |
Protein GI | 115352446 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.494092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACA ATACTTCCGA TCTCTTCGCC GGGTCCGACG CACCGGACGC CGATGCGCTG ACGCTCGGCA ATTACGCGGA GCAGGCGTAC CTCAGCTACG CGGTCAGCGT CGTGAAGAGC CGCGCGCTGC CCGACGTGTG CGACGGCCAG AAGCCGGTGC AGCGCCGGAT CCTGTTCGCG ATGAACGAAA TGGGCCTCGG CCCCGACGCG AAGCCGGTGA AGTCGGCGCG CGTGGTCGGC GACGTGCTCG GTAAATACCA CCCGCACGGC GACCAGTCGG CGTACGACGC GCTCGTGCGT CTCGCACAGG ATTTCTCGCT GCGCTATCCG CTGATCGACG GGCAGGGCAA CTTCGGCTCG CGCGACGGCG ACGGCGCGGC GGCGATGCGA TACACCGAAG CGCGGCTCAC GCCGATCTCG AAGCTGCTGC TCGACGAGAT CGACCAGGGC ACGGTCGACT TCATGCCGAA CTACGACGGC TCGTTCGAGG AACCGAAGAC GCTGCCGAGC CGCATGCCGT TCGTGCTGCT GAACGGCGCA TCGGGCATCG CGGTCGGCCT CGCCACCGAA ATCCCGTCGC ACAACCTGCG CGAGGTCGCG GCGGCGGCGG TCGCATTGAT CCGCAATCCG AAGCTCACGC ACGCGGAGCT GATGAACCTG ATCCCCGGCC CGGACTTCCC GGGCGGCGGC CAGATCATCT CGAGCGACAC CGAGATCGCG GCGGCCTATG AAACCGGCCG CGGCAGCCTG AAGGTGCGCG CGCGCTGGAA GATCGAGGAT CTCGCGCGCG GCCAGTGGCA ACTCGTCGTC ACCGAGCTGC CGCCGAGCAC GTCGGGCCAG AAGGTGCTCG AGGAAATCGA GGAGCTGACC AACCCGAAGC TCAAGCTCGG CAAGAAGACG CTCACGCCCG AACAGCTCAA CACGAAGAAG GCAATGCTCG ACCTGCTCGA CGCGGTGCGC GACGAGTCGG GCAAGGAAGC GGCGGTGCGG CTCGTGTTCG AGCCGAAGTC GCGCACGATT GACCAGACGG AATTCGTGAA CACGCTGCTC GCGTACACGA GCCTCGAGTC GAACGCGACG CTGAACCTCG TGATGATCGG CGCCGACGGC CGGCCGGGCC AGAAGGGGCT GCTGACGATC CTCGACGAAT GGGTGAAGTT CCGCCAGCTG ACGATGACGC GCCGGTCCCG CCATCGTCTC GCGAAGGTCG ACGACCGCAT CCACATCCTC GAAGGACGGA TGATCGTCTT CCTGAACATC GACGAGGTGA TTCGCATCAT CCGCGAGGCG GACGAGCCGA AGGCCGCGCT GATGAGCGCG TTCGGCCTCA CCGACCGCCA GGCGGAAGAC ATCCTCGAAA TCCGGCTGCG TCAGCTCGCG CGGCTCGAGA AGATCAAGAT CGAGAAGGAG CTCGAGACGC TGCGCGACGA GAAGGCGAAG CTCGAGGAGC TGCTCGCGAA CGAAAGCGCG ATGAAGCGGC TGATGATCAA GGAGATCGAG ACCGACGCGA AGCAGTACGG CGACGATCGC CGCACGCTGA TCCAGCAGGA AAAGCGCGCG ACGTTCGAGG CGAAGGTGGT GGACGAGCCG GTGACGGTCG TCGTGTCGCA GAAGGGCTGG GTGCGCGCGC TGAAGGGTCA CGGGCTCGAC CCGGCCGGCT TCACGTTCAA GGCGGGCGAC CACCTGTACG CGGCATTCCA GTGCCGCACG CCCGACCGCC TGATCGCGTG GGGCAGCAGC GGGCGCGTGT ACTCGGTCGA CGTGTCGGTG CTGCCGGGCG GCCGCGGCGA CGGCGTGCCG GTGACGTCGC TGATCGAGCT CGAATCGGGC TCGCACCTGA TGCACTACTT CGCGGCGCCG GTCGACCAGC AACTGCTGCT CGCGTCGAGC AACGGGTTCG GCTTCCTCGC GAAGGTCGGC GACATGGTGA GCCGCGTGAA GGCCGGCAAG GCATTCATGA CGATCGATGC GGGCGCGGTG CCGCTCGCGC CGATGCCGGT GCTGCCGAAC GCGACGCAGG TCGCGTGCCT GTCGAGCGGC GGCCGGCTGC TGGTGTTCGG GATGGACGAG ATGAAGACGC TGTCCGGCGG CGGCCGCGGC GTGATCCTGA TGGCGCTCGA CGACAAGGAA ACGCTCGTGC AGGCGCTCGC GATCGATCCG GCCGGCGTCG TGCTGATCGG CACCGGCCGC GGCGGCAAGG CGCAGGACGA GACGCTGTCG TACGCGGGGC TCGCGCCGCA CATCGGCAAG CGCGCACGCA AGGGCCGCGC GCCGGAGACG AAGCTCAAGG TCGTCAACGA ACTGCGTCCG CTGCTCGGCT GA
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Protein sequence | MDDNTSDLFA GSDAPDADAL TLGNYAEQAY LSYAVSVVKS RALPDVCDGQ KPVQRRILFA MNEMGLGPDA KPVKSARVVG DVLGKYHPHG DQSAYDALVR LAQDFSLRYP LIDGQGNFGS RDGDGAAAMR YTEARLTPIS KLLLDEIDQG TVDFMPNYDG SFEEPKTLPS RMPFVLLNGA SGIAVGLATE IPSHNLREVA AAAVALIRNP KLTHAELMNL IPGPDFPGGG QIISSDTEIA AAYETGRGSL KVRARWKIED LARGQWQLVV TELPPSTSGQ KVLEEIEELT NPKLKLGKKT LTPEQLNTKK AMLDLLDAVR DESGKEAAVR LVFEPKSRTI DQTEFVNTLL AYTSLESNAT LNLVMIGADG RPGQKGLLTI LDEWVKFRQL TMTRRSRHRL AKVDDRIHIL EGRMIVFLNI DEVIRIIREA DEPKAALMSA FGLTDRQAED ILEIRLRQLA RLEKIKIEKE LETLRDEKAK LEELLANESA MKRLMIKEIE TDAKQYGDDR RTLIQQEKRA TFEAKVVDEP VTVVVSQKGW VRALKGHGLD PAGFTFKAGD HLYAAFQCRT PDRLIAWGSS GRVYSVDVSV LPGGRGDGVP VTSLIELESG SHLMHYFAAP VDQQLLLASS NGFGFLAKVG DMVSRVKAGK AFMTIDAGAV PLAPMPVLPN ATQVACLSSG GRLLVFGMDE MKTLSGGGRG VILMALDDKE TLVQALAIDP AGVVLIGTGR GGKAQDETLS YAGLAPHIGK RARKGRAPET KLKVVNELRP LLG
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