Gene Bamb_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2328 
Symbol 
ID4309125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2566110 
End bp2567084 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID638150162 
Productalcohol dehydrogenase 
Protein accessionYP_774218 
Protein GI115352379 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAG CAATCCGATA CGACCAGCCG GGCGGCCCGG ACGTGATGAA GTGGGTCGAT 
GTCGAGGTCG GCGCGCCGAA GGCCGGCGAA GTCCGCATCC GGCAGCAGGC GGTCGGGCTC
AATTACATCG ACGTGTATTT CCGTACGGGC CTCTATCCGC AGCCGCTGCC CGGCGGGCTC
GGGATGGAGG CGGCGGGCGA GGTGACGGCC GTCGGCGACG GCGTGACCGC CTTCAAGGCG
GGCGATCGCG TCGCGTACGT CGGGCAGCCG CCGGGCGCGT ATGCGCAGGA GCGCGTGATG
CCGGCCGAGC GGCTCGTGAA GCTGCCCGAC GGGATCAGCG ATGACGACGC GGCCTCGGTG
ATGCTGCAAG GGCTGACCGC GCACTACCTG CTGCGCCGCA CGTACCCGGT GAAGGCCGGC
GACACGATCC TGATCCATGC GGCGGCCGGC GGCGTCGGCC TGCTCGTGTG CCAGTGGGCG
AAGGCGCTTG GCGCGACCGT GATCGGGACG GTGGGCTCCG ACGAGAAGGC CGCGCTCGCG
AAGGCGCACG GCTGCGATCA TCCGATCGTC TATACGCGCG AGAACTTCAC GCAGCGCGTG
AAGGAGATCA CGAACGGCGC GGGCGTGCCG GTGGTCTACG ATTCGATCGG CAAGGACACC
TACATCGGTT CGCTCGACTG CCTCGCGCCG CTCGGCTACT TCGTCAGCTT CGGCAATGCA
TCGGGCCCGC TGCCGGCGAT CGACTCGAAG GAGTTCTCGT CGCGCGGCTC GCTGTTCTTC
ACGCGGCCGA CGCTGTTCTC GTACATCGCG AAGCGCGCCG ATCTCGAAGC CGCGGCCGCC
GAGCTGTTCG ACGTGATCCT GACGGGCAAG GTGAAGACGA GCATCAACCA GCGCTATCCG
CTCGCGGAAG TCGGCCGCGC GCATGCCGAC CTCGAGTCGC GCAAGACGAC CGGCTCGACG
ATCCTCATTC CCTGA
 
Protein sequence
MPKAIRYDQP GGPDVMKWVD VEVGAPKAGE VRIRQQAVGL NYIDVYFRTG LYPQPLPGGL 
GMEAAGEVTA VGDGVTAFKA GDRVAYVGQP PGAYAQERVM PAERLVKLPD GISDDDAASV
MLQGLTAHYL LRRTYPVKAG DTILIHAAAG GVGLLVCQWA KALGATVIGT VGSDEKAALA
KAHGCDHPIV YTRENFTQRV KEITNGAGVP VVYDSIGKDT YIGSLDCLAP LGYFVSFGNA
SGPLPAIDSK EFSSRGSLFF TRPTLFSYIA KRADLEAAAA ELFDVILTGK VKTSINQRYP
LAEVGRAHAD LESRKTTGST ILIP