| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2225 |
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| Symbol | |
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| ID | 4311448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2453672 |
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| End bp | 2456179 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638150053 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_774115 |
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| Protein GI | 115352276 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGGG AAGTCTTGCT GAAGGTGCTG CGCGGAGGCT ACGCGCAGTT CGATCGCATC
GTGAAACTTG ACACGCCGCT TGGCGACGAT TGGCTCACGC CGCTGTACGT CAAGATCAAC
GCGCGGCTCG GGCGCAATTT CGAGGTGACC GTTGACGCCT CATCCGTCAT GGGCGACAAG
ATCAAGCTTA GCGCTCTCAT GCTGCAACCC GTCACGCTCT GGATTCGCCA GACCGACGGC
GGTTATCTGC CGATCCATGG CTATGTGCAG CGGGCGCGCC GCCTTGGAAA TGATGGAACC
GTCTCGTATT TTCAGCTTCA GTTCTCTTCG TGGCTGAGCT TTTTGAAGCT CAGCAGCGAT
CGGCGCGATT GGCAGGAAGC CAGCGGCTGG CAGATTCTCA CCGACGTATT CGACAAGCAT
CCGCAGGCGT CCGGCAACTA TGGGCAGGAA CTACGCGCGG CGATGCGCTC GTATTCGCAC
CGCGTGCAGT GGGAGACTGA CTGGAATTTC GTGCACCGGA GTCTGGAGGA AGTCGGCGTG
TTTCCGCGCT TCGATTTCGC AAAGGACGGC AAGTCGCACA AGGTCGTCAT GATGGACGAC
CTGTATTTCG GGCCGTCGCT GCCGAATTCG GAGATGAAGT TCAGCCACGC AGGTACCGAC
GAGGATTTCG ACGGACTCAC CCAGTTAAGC GAACAGCAGG ACGCCCAAAG CGCGACGCTG
ACGCTCGGCA CCGCCGACTA CAAGCGTCCG GACCTCGACA AACAGGTCAG TACGCCGGCG
GCCGATCTGG AGGATCTGCC CGGCCAAGGT GAAGACTATC TCTATACCGG CTCACAGACC
TGGGCCGAAT CCGATGCCGG ACAACAGCAG GCCCGCATCC GCACCGAGGA ATGGGCGTCG
CGAGCAAAGC GCTATTTCGC GATCGGCAGC CCGCGCTATG CACTACCCGG CTACTGGTTC
AAGGTGTCGG GGCATCCGGT TCTCGATGCC CTGCCGGAGG AAGAGCGCGA ATTGTCGATT
ATCGCGAGTG ACTGGCTGAT TCAAAACAAT CTGCCCGGCC TGGATGCGCT GACGCGGTTT
CCGCGCAGCC TGCGCAGCGA GATCGAACAG GTCCAGGCGG CTGGGACGGG TGCGACCGTG
AGTCACCGCG ATGGCGGCGT CGGATTTTTC CACGTCGAGA TCGAAGCGCA ACGTCGCAAG
ACGCCGTTCC GCAGCCCGTT CGAGCACGAG AAGCCGGAGA TGCATTTGCA GACGGCGATT
GTCGTGACGG ACAGCGATGA AGAAATCCTT ACGGACGACG GCAACCGTGT GCGGGTCCGG
ACATCGAACA GTCGAAACGA TCGCAATACG AAGTCGACGT CGTGGATTCG TGCGGCGATG
CCGGACGCCG GCTCTAGGCG CGGCGGCTAT TTCCCGTTGC GCAAAGATGA CCAGGTGCTC
CTCGGATTCG TAAATGGCGA TTGCGACCGG CCGGTGATCA TCTCGAGATT GCATGGTGGC
GCGACGATGC CGGTATGGCA TACGCACGGC CTGCTGTCCG GATTTCGGTC CCGCGAATAC
GGTGGAGACG GCTTCAACCA GCTCGTGCTG GATGACGCAA GCGGCCAGAA TCGGGTCCAG
CTTTCCACGA CGAGTTATGC GTCGCACCTC CACCTTGGCT ACCTGATCGA ACAGTCCGAT
AACACGCGCG GCTCGTTCGT GGGCAGTGGC TTCGATCTCA AATCGGAGGC ACACGGCGCG
ATCCGGGCGG TTCAGGGGCT GTCTATCTCA ACCCATCCAG CCGCCGTGCA GCCAATGAAC
GTGTCGGCTG CGACCGATCA GCTCGCGGCT TCGGAAGCGG TATTCGAGAC GGTCTCGCAG
GCGAGCGAAA CGAATCGGGC CGAAAGCCTG CAGGACGGCA GCGATGCGCT GAAAGCCTTT
ACCGAGATGA CGCAGCATAG TGTGCCGGGC GCAACACAAG GCGGGCGCAC GGCCGGCGGC
GGAACGGGGA GCGCCAGTGG GTTTGCGAAG CCGGCGCTGC TGCTGTCGAG CCCGGCGGGC
GTCGGACTTT CCAGCCAGCA ATCGATTCAC GCGTCGGCGA ATCAACAGGT CAACCTCGTG
GCGGGGAAGA ACGTCAACCT TGCGGGCGGG AAGTCGCTTC TCGCGAGCGT GATGGACAAG
ATCAGCCTGT ACGCGCAAAA CCTCGGGATC AAAATCTTCG CGACCAAAGG TCCCATCGAA
ATCCAGGCTC AGAACGATGC GCTGACGATG CTGGCGCAGC AGGACGTCAA GATCGAGAGC
GCGTCGGGAC GGATGATCTT GCGCGCGGAA AAGGAACTGA TTCTTAACGT CGGTGGTTCG
TATATCAAGA TCACGCCTGA CATGATCGAG AACGGGACGT CGGGCCAGAT TCTCGAGAAA
TGCGCGTCGT GGGACAAACC CGGGGCATCC ACCATGACGT TGCGAGACCC GTTGAACGGC
ACGCCGGTGT CAAAGCACGG CGGTTACGCG GACGATTTTT CCGGTTGA
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| Protein sequence | MSGEVLLKVL RGGYAQFDRI VKLDTPLGDD WLTPLYVKIN ARLGRNFEVT VDASSVMGDK
IKLSALMLQP VTLWIRQTDG GYLPIHGYVQ RARRLGNDGT VSYFQLQFSS WLSFLKLSSD
RRDWQEASGW QILTDVFDKH PQASGNYGQE LRAAMRSYSH RVQWETDWNF VHRSLEEVGV
FPRFDFAKDG KSHKVVMMDD LYFGPSLPNS EMKFSHAGTD EDFDGLTQLS EQQDAQSATL
TLGTADYKRP DLDKQVSTPA ADLEDLPGQG EDYLYTGSQT WAESDAGQQQ ARIRTEEWAS
RAKRYFAIGS PRYALPGYWF KVSGHPVLDA LPEEERELSI IASDWLIQNN LPGLDALTRF
PRSLRSEIEQ VQAAGTGATV SHRDGGVGFF HVEIEAQRRK TPFRSPFEHE KPEMHLQTAI
VVTDSDEEIL TDDGNRVRVR TSNSRNDRNT KSTSWIRAAM PDAGSRRGGY FPLRKDDQVL
LGFVNGDCDR PVIISRLHGG ATMPVWHTHG LLSGFRSREY GGDGFNQLVL DDASGQNRVQ
LSTTSYASHL HLGYLIEQSD NTRGSFVGSG FDLKSEAHGA IRAVQGLSIS THPAAVQPMN
VSAATDQLAA SEAVFETVSQ ASETNRAESL QDGSDALKAF TEMTQHSVPG ATQGGRTAGG
GTGSASGFAK PALLLSSPAG VGLSSQQSIH ASANQQVNLV AGKNVNLAGG KSLLASVMDK
ISLYAQNLGI KIFATKGPIE IQAQNDALTM LAQQDVKIES ASGRMILRAE KELILNVGGS
YIKITPDMIE NGTSGQILEK CASWDKPGAS TMTLRDPLNG TPVSKHGGYA DDFSG
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