Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2179 |
Symbol | |
ID | 4310085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2396991 |
End bp | 2398208 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638150004 |
Product | DNA polymerase IV |
Protein accession | YP_774069 |
Protein GI | 115352230 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.288104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTTTGT ACAGTATCGG CACCGTGAAT CCGACCATCA TCCCGCCTGC CGATCCTCCC CGCGAGCCGC CGCCTGGCGA TGCGCCGCCG CGCGTGCGCA AGATCATCCA TTGCGACTGC GACTGCTTTT ACGCGTCGGT GGAGATGCGC GACGACCCGT CGCTGCGCAA CCGGCCGCTC GCGGTCGGCG GCCGGCCCGA CCAGCGCGGC GTGATCGCGA CCTGCAACTA CGAGGCGCGG CGCTACGGCG TGCATTCGGC GATGTCGTCG GCGCTGGCGA TGCGCAAGTG TCCGGACCTG CTGATCCTGC CGTCCGCGAT GGACAAGTAC CGCGCGGCGT CGCGGCAGAT CATGGCGATC TATCGCGACT ACACGCACGA CGTCGAGCCG CTGTCGCTCG ACGAGGCTTA TCTCGACGTC AGCGGCTCCG AACTGTGCCA GGGCAGCGCG ACGCTGATCG CGCGGGAGAT CCGCCAGCGT GTGTACGACA CGGTGGGCGT GACGGTGTCG GCGGGCGTCG CGCCGAACAA GTTCATCGCG AAGATCGCGT CCGACTGGAA CAAGCCCGAC GGCCTGTTCG TCGTGCGCCC ACATGAAGTC GATGCGTTCG TCGCCGCGCT GCCCGTGCGC AAGCTGCACG GTGTCGGCAA GGTGACGGCC GCGCGGCTCG AGCGGCTCGG CATCCAGACC TGCGCGCAGT TGCGCGACTG GTCGCTGATC GACCTGCATC GCGACTTCGG CGCGTTCGGT CGACGGCTGT ACCAGCTGGC GCGCGGGATC GACGAGCGGC CGGTGCAGGC CGACCAGGAG CGCAAGTCGG TCAGCGTCGA GACGACCTAT GTGACAGACC TGACGACGCT CGAACAATGC GCGGACGAGA TCCGCCGCCT CGTCGTGCAG CTCGACGCGC GGATCGCGCG TGCGGGTGCT GTGCGGGCGA TCCGCAAGCT GTACGTGAAG ATTCGCTTCG CCGATTTCCA GCGCACGACG GTCGAATGCG TGGCCGACGC GACGAATGCG CAGACGGCGG TCACGCTGCT CGCGAAGGGG CTGCAGCGGC GCGCGCAGGC CGTGCGGCTG CTGGGCGTCG GCGTGCGCAT CGACGAGGAC ACGGCCGAGC GGCGCGGGCA GTTCTCGTTG TTCGACGATG AAGTCGACCA AGTTGACCAC GCCGACGATG CTGCCAACGC CGCCAACGCC AAACCCCCCG CACCATGA
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Protein sequence | MFLYSIGTVN PTIIPPADPP REPPPGDAPP RVRKIIHCDC DCFYASVEMR DDPSLRNRPL AVGGRPDQRG VIATCNYEAR RYGVHSAMSS ALAMRKCPDL LILPSAMDKY RAASRQIMAI YRDYTHDVEP LSLDEAYLDV SGSELCQGSA TLIAREIRQR VYDTVGVTVS AGVAPNKFIA KIASDWNKPD GLFVVRPHEV DAFVAALPVR KLHGVGKVTA ARLERLGIQT CAQLRDWSLI DLHRDFGAFG RRLYQLARGI DERPVQADQE RKSVSVETTY VTDLTTLEQC ADEIRRLVVQ LDARIARAGA VRAIRKLYVK IRFADFQRTT VECVADATNA QTAVTLLAKG LQRRAQAVRL LGVGVRIDED TAERRGQFSL FDDEVDQVDH ADDAANAANA KPPAP
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