| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2175 |
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| Symbol | |
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| ID | 4311040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2390336 |
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| End bp | 2392852 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638150000 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_774065 |
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| Protein GI | 115352226 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACCG ATCGGCTTTT CGCACGCTCG GCGCGACCGT CGGGCCCGCC GGCGGAGTCG
CAGCCGTCCC GTTGGCACCA CGGACCGTGG TGGTCCAATT CCTATTTGCT GACGCCGCTG
CTGTCGATCC TCGTGTTCCT CGTGGTGATG AGCCTGATTC TATGGAGCCT CAATCGCCGC
GAACAGCAGC AGCAGGAAGA CACGCTGTTC CGTAACGTCG CGTGGGCGCA GCAGCAGATC
CGCCTGTCGA TGACGGGTGC GCAGGAACAG CTGCAGGCGC TGTCGCGCGA TCTCGCGTCG
GGCCGCCTCG ACCAGAACGC GTTCCAGATG GCCGTGGCGG ACGTGATGCA GACGCATCCG
GAAATCCTCT ATCTGAACTG GTACACCGCG CCCGGCGTGC AGCGCTGGCC GGCCGTGCAC
CCGCCGCTGC TCGGCCAGCG GCTCGCGAAG CCCGGCGACG CCCAGATGCA GGACGCCGTG
CGCGGCGCGT ACGACGAAGC GCGCAGCACG CGCCGCCAGG CCTATTCGCC GCTGATCTAC
GACGACTTCG GCAACGGCTT CATCACGCTG CAGACGCCCG TGATGCGCGG CGACCGCGAA
TATCTCGGCT CGATCGCCGC GGTGTTCTCG GTCGAAGGGA TCCTGAAGCA CGACATCCCG
CAGGAGTTGT CGTCGAAGTA CAAGATCTCG ATCACCGACT CGAACAACCG CGAGCTGTCG
TCCACGTCGA CGCGCCCGCG CCTGCCGCGC GACTCCCATT ACGACCTGCC GCTCGATCCG
CCCGGCCAGG GGCTGACCGT GCGCGTGTAC GCGTTCCCGC AGCTCACGAA CCTGACCAAC
AACACGCTCG TGTGGCTCGT CGCCGGGCTG TCGTGCTTCG TGCTGTGGAG CCTCTGGAGC
CTGTGGAAGC ACACGCGCCA GCGCTTCGAG GCGCAGCAGG CGCTGTACGC GGAGGCATTC
TTCCGCCGCG CGATGGAAAA TTCGGTGCTG ATCGGCATGC GCGTGCTCGA CATGCACGGC
CGCATCACAC ACGTGAACCC CGCGTTCTGC CGGATGACGG GCTGGGATGA AACCGACCTG
GTCGGCAAGG TCGCGCCGTT CCCGTACTGG CCGCGCGACG CGTATCCGGA AATGCAGCGC
CAGCTCGACA TGACGCTGCG CGGCAAGGCG CCGAGCTCGG GCTTCGAGCT GCGCGTGCGG
CGCAAGAACG GCACGCTGTT CCATGCGCGC CTCTACGTGT CGCCGCTGAT CGACAGCTCG
GGCCGCCAGA CCGGCTGGAT GTCGTCGATG ACCGACATCA CCGAGCCAAA GCGCGCCCGC
GAGGAACTCG CGGCCGCGCA CGAGCGCTTC ACGACGGTGC TCGAAAGCCT CGACGCCGCG
GTGTCGGTGC TCGCCGCCGA CGAAGCCGAG CTGCTGTTCG CGAACCGCTA CTACCGCCAC
CTGTTCGGGA TTCGCCCCGA CGGCCATCTC GAGCTGTCGG GCGGCGGCTT CGACCGCGCG
CAGGCGTCGT CCGACTCGAT CGACATGGTC GACACGTTCG CGGGCCTGCC GGCCGCCGCG
CTGACGAGCA GCACGGCCGA CGCGCAGGAG GTATACGTCG AGAGCATCCA GAAATGGTTC
GAGGTGCGCC GCCAGTACAT CCAGTGGGTG GACGGCCACC TCGCGCAGAT GCAGATCGCG
ACCGACATCA CGACCCGCAA GAAGGCGCAG GAACTCGCGC ACCAGCAGGA AGAGAAGCTG
CAGTTCACGA GCCGATTGAT GACGATGGGT GAAATGGCGT CGTCGATTGC TCACGAATTG
AATCAGCCGC TCGCCGCGAT CAACAACTAC TGCTCGGGCA CGCTCGCGCT CGTGAAGAGC
GGCCGCGGCA CGCCCGAGAC GCTGCAGCCC GCGCTGGAAA AGACCGCGCA GCAGGCGCTG
CGCGCCGGGA TGATCGTCAA GCGGATCCGC GAATTCGTGA AGCGCAGCGA GCCGAAGCGC
CAGCCGGCGC GGGTCGCGGA CATCGTCGCC GACGCGGTCG GGCTCGCCGA AATCGAGGCC
AGGAAGCGCA GGATCCGGAT CGTCACGGAA ATCCTCGCAA GAATGCCTAT TATTTATGTC
GACCCCGTGT TGATCGAGCA GGTACTGATG AACCTGATGA AGAACGCGGC CGAGGCGATG
GCCGACGTGA AGCCGGCGAC GGTGGACGGC GTGATCCGCG TCGTCGCCGA CATCGACGCC
GGTTTCGTCG ACATCCGCGT GATCGACCAG GGTCCGGGCG TCGACGAGGC AACCGCCGAA
CGCCTGTTCG AACCGTTTTA CAGCACCAAG TCCGACGGCA TGGGCATGGG GCTGAACATC
TGCCGTTCGA TCATCGAATC GCATCGGGGG CGTCTGTGGG TGGTCAACAA TGTCGAACCG
GATGGCCGCA TTTCCGGCGC GACATTCCAC TGCAGCCTGC CCATTGGGGA ACCCGCTGAT
CTCGGCCAAG GGGGGCGCGA GGCATCGGCA TCACATACCG TTACGGGAGA ACTATGA
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| Protein sequence | MLTDRLFARS ARPSGPPAES QPSRWHHGPW WSNSYLLTPL LSILVFLVVM SLILWSLNRR
EQQQQEDTLF RNVAWAQQQI RLSMTGAQEQ LQALSRDLAS GRLDQNAFQM AVADVMQTHP
EILYLNWYTA PGVQRWPAVH PPLLGQRLAK PGDAQMQDAV RGAYDEARST RRQAYSPLIY
DDFGNGFITL QTPVMRGDRE YLGSIAAVFS VEGILKHDIP QELSSKYKIS ITDSNNRELS
STSTRPRLPR DSHYDLPLDP PGQGLTVRVY AFPQLTNLTN NTLVWLVAGL SCFVLWSLWS
LWKHTRQRFE AQQALYAEAF FRRAMENSVL IGMRVLDMHG RITHVNPAFC RMTGWDETDL
VGKVAPFPYW PRDAYPEMQR QLDMTLRGKA PSSGFELRVR RKNGTLFHAR LYVSPLIDSS
GRQTGWMSSM TDITEPKRAR EELAAAHERF TTVLESLDAA VSVLAADEAE LLFANRYYRH
LFGIRPDGHL ELSGGGFDRA QASSDSIDMV DTFAGLPAAA LTSSTADAQE VYVESIQKWF
EVRRQYIQWV DGHLAQMQIA TDITTRKKAQ ELAHQQEEKL QFTSRLMTMG EMASSIAHEL
NQPLAAINNY CSGTLALVKS GRGTPETLQP ALEKTAQQAL RAGMIVKRIR EFVKRSEPKR
QPARVADIVA DAVGLAEIEA RKRRIRIVTE ILARMPIIYV DPVLIEQVLM NLMKNAAEAM
ADVKPATVDG VIRVVADIDA GFVDIRVIDQ GPGVDEATAE RLFEPFYSTK SDGMGMGLNI
CRSIIESHRG RLWVVNNVEP DGRISGATFH CSLPIGEPAD LGQGGREASA SHTVTGEL
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