Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2155 |
Symbol | lysS |
ID | 4311020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2367985 |
End bp | 2369511 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638149980 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_774045 |
Protein GI | 115352206 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.351617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAC CGACCCAAAC GCAGCCCGCC GTCGCGGCGG ACGAAAACCA GATCATCGCC GAGCGCCGCG AGAAGCTGCG CGCCTTGCGC GAGCAAGGCG TCGCCTATCC GAACGATTTC CGGCCGACGC ATCACGCCGC CGATCTCCAG GCAACCTTCG CCGACTCGGA CAAGGCCGCG CTCGAAGCGA ACCCGGTCGA GGTGTCGGTC GCCGGCCGCA TGATGCTCAA GCGCGTGATG GGCAAGGCGA GCTTCGCGAC GGTGCAGGAC GGTTCGGGCC AGATCCAGTT CTTCGTGACG CCGAACGACG TCGGCGCGGA AACCTACGAC GCATTCAAGA AGTGGGACCT CGGCGACATC GTCGCCGCCC GCGGCGTGCT GTTCCGCACC AACAAGGGCG AGCTGTCGGT CCAGTGCAAG GAGCTGCGCC TGCTGTCGAA GGCGCTGCGC CCGCTGCCGG ACAAGTTCCA CGGCCTCGCC GACCAGGAAA TGCGCTATCG CCAGCGCTAC GTCGACCTGA TCGTCACGCC GGAAACGCGC GACACGTTCC GCGCGCGCAC CCGCACCATC GCGTCGATCC GCAAGTTCAT GGACAACGCC GACTTCATGG AAGTCGAAAC GCCGATGCTG CACCCGATCC CGGGCGGCGC CGCGGCCAAG CCGTTCGTCA CGCATCACAA CGCGCTCGAC ATGCAGATGT TCCTGCGCAT CGCGCCGGAG CTGTACCTGA AGCGCCTGAT CGTCGGCGGC TTCGAGCGCG TGTTCGAAAT CAACCGCAAC TTCCGGAATG AAGGCGTGTC GCCGCGCCAC AACCCGGAAT TCACGATGAT GGAGTTCTAC GCCGCGTACA CCGATTACCG CTGGCTGATG GACTTCACCG AGCAGCTGAT CCGCCAGGCG GCGATCGATG CGCTCGGCAC CGCGACGATC CAGTACCAGG GCCGCGAACT CGACCTCGCG AAGCCGTTCC ACCGCCTGAC GATCACGCAG GCGATCCAGA AGTACGCGCC GCAGTACACC GACGGCCAGC TGTCGGACGA CGCGTTCCTG CGTACCGAAC TGAAGCGCTT CGGCGTCGAC GTGTCGCAGC CGGCCTTCCT GAACGCCGGC ATCGGCGCGC TGCAGCTCGC ACTGTTCGAG GAAACCGCCG AATCGCAGCT GTGGGAGCCG ACCTACATCA TCGACTACCC GGTCGAAGTG TCGCCGCTCG CACGCGCGTC GGACACGACG CCGGGCATCA CCGAGCGTTT CGAGCTGTTC ATGACGGGCC GCGAGATCGC GAACGGCTTC TCGGAGCTGA ACGATCCGGA AGACCAGGCC GCGCGCTTCA AGAAGCAGGT CGAGCAGAAG GATGCCGGCG ACGAGGAAGC GATGTTCTTC GACGCCGACT ACATCCGCGC GCTCGAACAC GGGATGCCGC CGACGGGTGG CTGCGGGATC GGCATCGACC GTCTCGTGAT GCTGCTGACC GACAGCCCGA CGATCCGCGA CGTGCTGCTG TTCCCGCACC TGCGCCGCGA AGACTGA
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Protein sequence | MTEPTQTQPA VAADENQIIA ERREKLRALR EQGVAYPNDF RPTHHAADLQ ATFADSDKAA LEANPVEVSV AGRMMLKRVM GKASFATVQD GSGQIQFFVT PNDVGAETYD AFKKWDLGDI VAARGVLFRT NKGELSVQCK ELRLLSKALR PLPDKFHGLA DQEMRYRQRY VDLIVTPETR DTFRARTRTI ASIRKFMDNA DFMEVETPML HPIPGGAAAK PFVTHHNALD MQMFLRIAPE LYLKRLIVGG FERVFEINRN FRNEGVSPRH NPEFTMMEFY AAYTDYRWLM DFTEQLIRQA AIDALGTATI QYQGRELDLA KPFHRLTITQ AIQKYAPQYT DGQLSDDAFL RTELKRFGVD VSQPAFLNAG IGALQLALFE ETAESQLWEP TYIIDYPVEV SPLARASDTT PGITERFELF MTGREIANGF SELNDPEDQA ARFKKQVEQK DAGDEEAMFF DADYIRALEH GMPPTGGCGI GIDRLVMLLT DSPTIRDVLL FPHLRRED
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