Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2089 |
Symbol | |
ID | 4309385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2293619 |
End bp | 2294527 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638149913 |
Product | patatin |
Protein accession | YP_773979 |
Protein GI | 115352140 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0014749 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCCC CTCGCCTGTC GCGCCGTCAC TTCACGATCG CGTGCGCGTC CGCCAGCCTC GCCGCCTGTA CGTCGATCGG CGACAAATCC CGTCCCGCGC AGTCGCAGGA AAAACCCGTG AAGATCGGCA TCGCGCTCGG CGGCGGCGCC GCCCGCGGCT TCTCGCACAT CGGCGTGCTG AAGGCGCTGG AGGCACGCGG CATCCCGGTC GAGCTCGTCG CGGGCACGAG CGCCGGCTCG GTGGTCGCCG CGCTGTACGC GTCCGGGATG AGCGCGCTGC AGATCAACAA GATCGCACTC GACATGGATC AGGCGGCGAT CAGCGACTGG GCGCTGCCGT TCCGCTCGCG CGGCTTGCTG CAGGGCGTCG CGCTGCAGAA CTTCCTGAAC AAGACGCTCA ACAACCGGCC GATCGAGAAG ATGGCGAAGC CGCTCGGCAT CGTCGCGACA GATCTGCAGA GCGGCCAGCC GATCCTGTTC CAGCAGGGCA ATACGGGGCT CGCGGTGCGC GCGTCGTGCA GCGTGCCGTC GGTGTTCGAA CCGGTGAGGA TCGGCAACCG CGAGTACGTC GACGGCGGCC TCGTGAGTCC GGTGCCCGCG TCGTTCGCAC GCAAGATGGG CGCGAGCTTC GTGATCGCGG TCGACATCTC GGCGCGGCCG GACGGCGCGG CGACCAACAA CCCGATCGAG ATGCTGCTGC AGACCTTCAC GATCATGGGC CAGACGATCA AGTCCTACGA GCTCGACAAG TACGCGGACG TCGTGATCCG CCCGAACCTC GCGGCGATGG GCGGCAGCGA CTTCAACCAG CGCAACGCGG CAATCCTCGC GGGCGAGGAA GCCGTCGCGC GTATCATGCC CGAGCTGCAG CGCAAGCTCG CGGCGGCCCG CGGCGTCGCG GCGGCGTAA
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Protein sequence | MSSPRLSRRH FTIACASASL AACTSIGDKS RPAQSQEKPV KIGIALGGGA ARGFSHIGVL KALEARGIPV ELVAGTSAGS VVAALYASGM SALQINKIAL DMDQAAISDW ALPFRSRGLL QGVALQNFLN KTLNNRPIEK MAKPLGIVAT DLQSGQPILF QQGNTGLAVR ASCSVPSVFE PVRIGNREYV DGGLVSPVPA SFARKMGASF VIAVDISARP DGAATNNPIE MLLQTFTIMG QTIKSYELDK YADVVIRPNL AAMGGSDFNQ RNAAILAGEE AVARIMPELQ RKLAAARGVA AA
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