| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2088 |
|---|
| Symbol | gltX |
|---|
| ID | 4309384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2291929 |
|---|
| End bp | 2293338 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638149912 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_773978 |
|---|
| Protein GI | 115352139 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000151116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTC CTGTCCGTAC CCGCTTCGCG CCGAGTCCCA CCGGCTTCAT CCACCTCGGC
AACATCCGCT CCGCGCTCTA TCCGTGGGCG TTCGCCCGCA AGATGAAGGG CACGTTCGTG
CTGCGTATCG AGGATACCGA CGTCGAGCGT TCGTCGCAGG AAGCCGTCGA CGCGATCCTC
GAAGGGATGC AGTGGCTCGG CCTCGATTTC GACGAAGGCC CGATCTACCA GATGCAGCGG
ATGGACCGCT ATCGCGAGGT GCTCGCGCAG ATGCTCGAGC AGGGCCTCGC GTACCCGTGC
TACATGTCGG CCGAGGAGCT CGACGCGCTG CGCGAACGCC AGCGCGAGGC CGGCCTGAAG
CCGCGCTACG ACGGCACGTG GCGTCCGGAG CCGGGCAAGG TGCTGCCCGA GCCGCCGGCC
GGCGTGAAGC CGGTGCTGCG TTTCCGCAAC CCGCTGACCG GCACGGTCGT GTGGGACGAC
GCGGTGAAGG GCCGTGTCGA GATCTCGAAC GAGGAACTCG ACGACCTCGT GATTGCGCGC
CCGGACGGCA CGCCGATCTA CAACTTCTGC GTCGTCGTGG ACGACATGGA CATGAACATC
ACGCACGTGA TCCGTGGCGA CGACCACGTG AACAACACGC CGCGCCAGAT CAACATCCTG
CGCGCGCTCG GCGGCGAGCC GCCCGTCTAT GCGCACCTGC CGACCGTGCT GAACGAGCAG
GGCGAGAAGA TGAGCAAGCG GCATGGCGCG ATGAGCGTGA TGGCTTACCG TGACGCCGGC
TTCCTGCCGG AGGCCGTCGT CAACTATCTC GCGCGTCTGG GCTGGTCGCA CGGCGACGCT
GAAATCTTCA CGCGCGAACA GTTCGTCGAA TGGTTCGACC TCGAGCATCT CGGCAAGTCG
CCCGCGCAGT ACGACCACAG CAAGCTGAGC TGGCTGAACG CCCACTACAT CAAGGAAGCC
GACAACGCGC GCCTCGCCGC GCTGGCGAAG CCGTTCCTCG ACGCGCTCGG CATCGAGGAG
GCGGCGATCG CGACGGGCCC CGCGCTCGAC GCGGTGGTCG GCCTGATGAA GGATCGCGCG
ACGACGGTCA AGGAGATCGC CGAAGGCGCC GCGATGTTCT ACCGTGTGCC GGCGCCGGAC
GCCGACGCAC TCGCGCAGCA CGTGACCGAT GCGGTGCGTC CGGCGCTGGC CGACCTCGTC
GCCGCACTGA AGGCGGCCGA CTGGACGAAG GAAGCCGTGT CCGCGGCGCT GAAGGCGACG
CTCGGCACGC ACAAGCTAAA GATGCCGCAG CTCGCGATGC CGGTGCGCCT GCTGGTGGCG
GGCACGACGC ATACGCCGTC GATCGACGCG GTGCTCGTGC TGTTCGGTCG CGACGTCGTG
GTGTCGCGTA TCGAGGCCGC GCTGGCCTGA
|
|---|
| Protein sequence | MTRPVRTRFA PSPTGFIHLG NIRSALYPWA FARKMKGTFV LRIEDTDVER SSQEAVDAIL
EGMQWLGLDF DEGPIYQMQR MDRYREVLAQ MLEQGLAYPC YMSAEELDAL RERQREAGLK
PRYDGTWRPE PGKVLPEPPA GVKPVLRFRN PLTGTVVWDD AVKGRVEISN EELDDLVIAR
PDGTPIYNFC VVVDDMDMNI THVIRGDDHV NNTPRQINIL RALGGEPPVY AHLPTVLNEQ
GEKMSKRHGA MSVMAYRDAG FLPEAVVNYL ARLGWSHGDA EIFTREQFVE WFDLEHLGKS
PAQYDHSKLS WLNAHYIKEA DNARLAALAK PFLDALGIEE AAIATGPALD AVVGLMKDRA
TTVKEIAEGA AMFYRVPAPD ADALAQHVTD AVRPALADLV AALKAADWTK EAVSAALKAT
LGTHKLKMPQ LAMPVRLLVA GTTHTPSIDA VLVLFGRDVV VSRIEAALA
|
|---|
| |