| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2039 |
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| Symbol | lpxB |
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| ID | 4311612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2233197 |
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| End bp | 2234366 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149856 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_773929 |
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| Protein GI | 115352090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.665619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTCC CGACCAATCA GCTCCGGCTC GCAATGGTGG CCGGCGAGCC GTCGGGCGAT
CTGCTCGCGG CGTCGCTGCT CGGCGGGCTT CAAGAGCGGC TGCCCGCGTC GACCCGCTAC
TACGGGATCG GCGGGCAGCG GATGCTCGCG CACGGCTTCG ACTCGCACTG GCAGATGGAC
AAGCTCACGG TGCGCGGCTA CGTCGAGGCG CTGGGCCAGA TTCCCGAGAT CCTGCGGATT
CGCGGCGAGT TGAAGCGCCA GCTGCTCGCG GAGCGGCCCG ACGCGTTCAT CGGCGTCGAC
GCGCCCGACT TCAACTTCAG CGTCGAGCAG GCCGCGCGCG ATGCGGGCAT CCCGTCGATC
CACTTCGTGT GCCCGTCGAT CTGGGCGTGG CGCGGCGGGC GGATCAAGAA GATCGCGAAG
TCCGTCGACC ACATGCTGTG CCTGTTCCCG TTCGAACCGG CGATCCTCGA CAAGGCGGGT
GTCGCATCGA CGTATGTCGG TCATCCGCTC GCCGACGAGA TTCCGCTCGA GCCCGACACG
CACGGCGCGC GCATCGCGCT CGGCTTGCCC GCAGACGGCC CGGTGATCGC GGTGCTGCCG
GGCAGCCGGC GCTCGGAGAT CGGACTGATC GGCCCGACGT TCTTCGCGGC GATGGCGCTG
ATGCAGCAGC GTGAGCCCGG CGTGCGGTTC GTGATGCCGG CGGCGACGCC TGCGCTGCGC
GAACTGCTGC AGCCGCTCGT CGACGCCCAT CCGCAACTCG CGCTGACGAT CACCGACGGC
CGCTCGCAGG TCGCGATGAC AGCCGCCGAC GCGATCCTCG TGAAGAGCGG CACCGTCACG
CTGGAAGCCG CGCTGCTGAA GAAGCCGATG GTGATCTCGT ACAAGGTGCC CTGGCTGACC
GGGCAGATCA TGCGCCGGCA GGGTTATCTG CCATACGTCG GCTTGCCGAA CATCCTGGCG
GGGCGCTTCG TCGTGCCCGA GTTGCTGCAG CATTTCGCGA CGCCCGAGGC GCTCGCCGAT
GCGACGCTTA CGCAGCTGCG CGACGACGCG AACCGCCGCA CGCTGACCGA AGTCTTTACC
GAAATGCATC TTTCGCTGCG TCAGAACACG GCCGCGAAGG CCGCCGAAGC GGTCGTGCGC
GTGCTCGAGC AACGCAGGGG GCGCGCATGA
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| Protein sequence | MSLPTNQLRL AMVAGEPSGD LLAASLLGGL QERLPASTRY YGIGGQRMLA HGFDSHWQMD
KLTVRGYVEA LGQIPEILRI RGELKRQLLA ERPDAFIGVD APDFNFSVEQ AARDAGIPSI
HFVCPSIWAW RGGRIKKIAK SVDHMLCLFP FEPAILDKAG VASTYVGHPL ADEIPLEPDT
HGARIALGLP ADGPVIAVLP GSRRSEIGLI GPTFFAAMAL MQQREPGVRF VMPAATPALR
ELLQPLVDAH PQLALTITDG RSQVAMTAAD AILVKSGTVT LEAALLKKPM VISYKVPWLT
GQIMRRQGYL PYVGLPNILA GRFVVPELLQ HFATPEALAD ATLTQLRDDA NRRTLTEVFT
EMHLSLRQNT AAKAAEAVVR VLEQRRGRA
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