| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2026 |
|---|
| Symbol | |
|---|
| ID | 4309068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2220616 |
|---|
| End bp | 2221380 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638149843 |
|---|
| Product | protein of unknown function DUF899, thioredoxin family protein |
|---|
| Protein accession | YP_773916 |
|---|
| Protein GI | 115352077 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.517928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC ATCTCACCGG AACACGCGCC GAATGGCTGG CCGCGCGCCG CGCGCTGCTC
GACGCGGAAA AGACACTGAC ACGGCAGAGC GACGAGCTCG CGCGGCGGCG CCAGGCGCTG
CCGTGGGTGC GCGTCGACAA GACCTACCGG TTCGATACCG AGCACGGCCC GGCGACGCTC
GACGATCTGT TCGGCGGCCG CTCGCAACTG CTCGTCTATC ACTTCATGTT CGGCCCCGAC
TACAAGGCCG GCTGCCCGTC GTGCTCGGCG CTGGCCGATG GCTTCGACGG CTTTGCGGTC
CACCTCGCGA ACCACGACGT GACGCTCGCC GCGGTGTCGC GGGCGCCGCT CGCGAAGCTG
CTCGCGTACC GGCAGCGGAT GGGCTGGCGC TTTCCGTGGG CATCGTCGGA CGGCGGTGAG
TTCAATTTCG ACTTCAACGT GTCGTTCACC GAAGCGCAGC AGCGCGCGGG CGACGTCGAA
TACAACTACG CGCGGGCCGG CCACGCGATG GACATGGACC CCCCGCCTGC CGCCGTCGCG
CAGTTCGCGG CGACGTGCGG TACCGACGCC GCCACGTACT CGCTCGACCG GCCGGGGATG
AGCGCGTTCG TGCGCGAGGA CGGCGTCGTC TATCATACGT ATTCGACCTA CGCGCGCGGG
CTCGACGGAC TGTGGGGCAT GTACCAGTGG CTCGATCGCG CGCCGCTCGG GCGCAACGAG
ACCGGCGTGT GGTGGCGTCG TCATGACGAA TACGCACGCG GTTGA
|
|---|
| Protein sequence | MTTHLTGTRA EWLAARRALL DAEKTLTRQS DELARRRQAL PWVRVDKTYR FDTEHGPATL
DDLFGGRSQL LVYHFMFGPD YKAGCPSCSA LADGFDGFAV HLANHDVTLA AVSRAPLAKL
LAYRQRMGWR FPWASSDGGE FNFDFNVSFT EAQQRAGDVE YNYARAGHAM DMDPPPAAVA
QFAATCGTDA ATYSLDRPGM SAFVREDGVV YHTYSTYARG LDGLWGMYQW LDRAPLGRNE
TGVWWRRHDE YARG
|
|---|
| |