Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1996 |
Symbol | |
ID | 4311762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2191679 |
End bp | 2192872 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149813 |
Product | major facilitator transporter |
Protein accession | YP_773886 |
Protein GI | 115352047 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.566259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGC GCATGCCTTT CGTCATCTAC GTCTTCGCGC TGTGCGCGTT CGCCCTGGGT TTCACCGAGT TCGTGACCAT CGGCTTGGTG TCCACTATTT CCGCCGATCT GCATGCCAGC GTCGCCCAGG TCGGCACGGC GGTCACGGCC TATGCGCTGG GCGCGGTGAT TGGTGCGCCG GGCCTGACCG CGCTGGCCAC ACGCTGGCCG CGCAAGCGGT TGCTGCTGGT GGCGATGGGA CTGTTCACGC TGGGCAACGC GGTGGTCAGC CTGTCCGATG CGCTGACGCC GATGCTGGTC GCCCGCTTTG CCTCGGGCCT GGGGCATGGG GTGTTCCTCG CGGTGGCGTC CAGCGTCGCC ACGCAACTGG CGGGCCGGCA TCGGGCCGGG GCGGCAGTGG CCGTGGTATT TGGCGGCCTG ACGCTGGCCC TGGCGCTGGG CGTTCCGCTC GGCACCTACC TGGGCAGCGT GTTGAGCTGG CAGGTCATCT TCATGGCAGT AGCCGCGAGC GGCGCGGTTG GCTTCCTGGG CCTGCTGGCC CTGATGCCGA CGGATCGGGA CGACGCCTCG GCGCAGGCCA ACGCGATGGA TGGCCTGAAA GCCATGTTCA ATCCGCGTCT GCTGGCCGGG GCCGGCATTA CCGTGCTGGC GTATGCGGGG TCGTTCGCGC TTTACACCTA CATTTCGCCG ATCCTGCTGC AGGTGACGAA CGTCAGCGAG AGCACGGCCA GCCTGCTGAT GCTGGGCTAC GGCGTGATGG CCGCCATCGG CAACATCTGG GGCGGACGTC TGACCGACCG CAAGGGCGCG GACTTCGCGG TGATGACCGT ACTGGTCGGC CTGGCTGTGG TGCTGTCGGC GATCTGGGCA TCGGCACCGT CGTTGCCATT GATGGTGTTG CTGACGGGCC TGCTGGGTGC GCTGACCTAT GCGGCGGTGC CGGCCTTGCA GGCGCGGGTG ATCGGGCTGT CGCACATCCA CGCGCCGCAG GCGCCGGCGG TGGCGGCTGG GCTGAACATC GCCGGCTTCA ATGGCGGTAT CGCGCTGGGT TCGCTGCTGG GCGGGGCCAG CCTGGAGGCG ATGGGGCTGA CCAGCACGGC CTGGGTCGGT GCGGTGGCCG TGGGCCTGGG GATCGTCTGG ATGCTCTGGC AGATGCGAGG AAACTGCGCT CGACGCACCG AAGTCCCTGG ATGA
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Protein sequence | MNERMPFVIY VFALCAFALG FTEFVTIGLV STISADLHAS VAQVGTAVTA YALGAVIGAP GLTALATRWP RKRLLLVAMG LFTLGNAVVS LSDALTPMLV ARFASGLGHG VFLAVASSVA TQLAGRHRAG AAVAVVFGGL TLALALGVPL GTYLGSVLSW QVIFMAVAAS GAVGFLGLLA LMPTDRDDAS AQANAMDGLK AMFNPRLLAG AGITVLAYAG SFALYTYISP ILLQVTNVSE STASLLMLGY GVMAAIGNIW GGRLTDRKGA DFAVMTVLVG LAVVLSAIWA SAPSLPLMVL LTGLLGALTY AAVPALQARV IGLSHIHAPQ APAVAAGLNI AGFNGGIALG SLLGGASLEA MGLTSTAWVG AVAVGLGIVW MLWQMRGNCA RRTEVPG
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