Gene Bamb_1995 details

Gene Information

• Locus tag: Bamb_1995
• ID: 4311761
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2190971
• End bp: 2191675
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638149812
• Product: ThiJ/PfpI domain-containing protein
• Protein accession: YP_773885
• Protein GI: 115352046
• COG category: [R] General function prediction only
• COG ID: [COG0693] Putative intracellular protease/amidase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAAC GCATTCTTTT CGTCCTGACC AGCCACGACC GCAAGGGACC GGCCGGCGCC 
GCCGACGCCG CGCCCAGCGG TTTCTATCTG TCCGAGGTCA CGCATCCGCA TCGGGTGTTG 
GCCGACGCCG GCCATGCGGT CGATTTCGTC AGCCCCAAGG GCGGCAAGAC GCACGTCGAT 
GGACTCGACC TGGACGATCC GATCAATGCC GCGTTCTGGA ACAATGCGGC GCTACGCGGT 
GCCACCGAGA ACGCCTTGGC ACCCGCGCAG GTCGATCCCG ACGCTTACGC CGCAATCTTC 
TACGCCGGCG GCCACGCGAC GATGTGGGAC TTCCCCGACA ACGCCGAACT GTCGGCCATC 
GCGGCGCGTA TCTACGAACG TGGCGGCGTG GTCGCTGCGG TCTGCCACGG CCCGGCCGGG 
CTGGTGAACC TCAAGCTGTC CGATGGTCGT TATCTTGTCG CGGGCAAGGA CGTGTCGGCC 
TTCACCAACG ACGAGGAACG CGCGGTCGGC CTGTACGACA CCGTGCCGTT CCTGCTGGCC 
GATGCCCTGC AGGAACGCGG TGCGCGGCAT GTGCCCGCGC CGAACTTCCA GGCGCAGGTC 
GTGGTAAGCG ACAGACTGGT GACGGGCCAG AACCCCGCTT CGGCCAAGGG CGTGGCCGAA 
GCGATGCTGT CGCTGCTGGA AGCGGCATCC GTGGAGCGGG CCTAA 

 

Protein sequence

MTQRILFVLT SHDRKGPAGA ADAAPSGFYL SEVTHPHRVL ADAGHAVDFV SPKGGKTHVD 
GLDLDDPINA AFWNNAALRG ATENALAPAQ VDPDAYAAIF YAGGHATMWD FPDNAELSAI 
AARIYERGGV VAAVCHGPAG LVNLKLSDGR YLVAGKDVSA FTNDEERAVG LYDTVPFLLA 
DALQERGARH VPAPNFQAQV VVSDRLVTGQ NPASAKGVAE AMLSLLEAAS VERA