Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1942 |
Symbol | |
ID | 4310180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2140426 |
End bp | 2141355 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638149759 |
Product | LysR family transcriptional regulator |
Protein accession | YP_773832 |
Protein GI | 115351993 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.247873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGC AACGCGAGGC GATCGACACG TACCTCTTGC GCGTCTTGCA CACCTTGTTG ATGGAGCGCA GCGTCACGCG CGCGGCCGTC AAACTGAACC AGTCGCAACC GGCGATCAGT GCCGCGCTGC GGCGCCTGCG CGACATCACC GGCGACCCGC TCCTCGTGCG CGGCAAGTCC GGCATGGTCC CGACCGAATA CGGGCTGCGC CTGCTCGAAC CGGTGCAGAA CGCCCTGCGT GAAATCGAGC GCATCAAGTT CCAGCAGCAC AATTTCGACC CGGCCACGTC GATCCGCTGC TACCGGATCG GCTGCCCCGA CTACCTGAAC GTGCTGTTCG TGCCGACCGT CGTCGAGCGC TTCCGCCAGG CCGCGCCGAA TGCGACGCTC GAGTTCCACT CGCTCGGCCC CGCGTTCGAC TACGAGCTCG CGCTGGAAGA CGGCAAGCTC GACATCGTCG TCGGCAACTG GCCCGAGCCG CCCGAACAGC TGCATCTGTC GAACCTGTTC GTCGACGAAA TCGTCTGCCT GATGAGCAAC ACGCATCCGT TCGCGAAGCG CGGCGGGCTC ACGCTCGACC AGTATCTGAA CGCGCCGCAT CTCGCGCCGA CGCCGTACTC GGTCGGCCAG CGCGGCGCGA TCGACGTGCA CCTCGCGCGC GAGCGGCTCA AGCGCCACGT GGTCGTCACG CTGCCGTACT TCAACCTCGC ACCGTACGTG CTGGTGAAGT CCGACCTGAT CTTCACGACG ACGCGCCTGT TCGCCGATCA TTACGCGAAG TTCCTGCCGC TGTCGGTCGT GCCGGCGCCG CTCGACTTCC CGCCGATGCA GTACTACCAG CTGTGGCACG AACGCTGTCA CTATTCCGAC GAAGTGCGCT GGCTGCGCAG CCTCGTCGCC GAAGCGACCC GCACGCTGAT CGAGGCTTGA
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Protein sequence | MSQQREAIDT YLLRVLHTLL MERSVTRAAV KLNQSQPAIS AALRRLRDIT GDPLLVRGKS GMVPTEYGLR LLEPVQNALR EIERIKFQQH NFDPATSIRC YRIGCPDYLN VLFVPTVVER FRQAAPNATL EFHSLGPAFD YELALEDGKL DIVVGNWPEP PEQLHLSNLF VDEIVCLMSN THPFAKRGGL TLDQYLNAPH LAPTPYSVGQ RGAIDVHLAR ERLKRHVVVT LPYFNLAPYV LVKSDLIFTT TRLFADHYAK FLPLSVVPAP LDFPPMQYYQ LWHERCHYSD EVRWLRSLVA EATRTLIEA
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