| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1922 |
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| Symbol | |
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| ID | 4310926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2116982 |
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| End bp | 2117893 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638149739 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_773812 |
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| Protein GI | 115351973 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.691361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGAAT GCCGCGCTCG ACGTGCCGGC CCCGCGCCGG CGCGCGCCCC CGAACCCGCC
TCCGCCACGA TCCCACCCGT GAACTTCGAC GACTACTGTC AGCAAAAGGC CGCCCCCGCG
GGCTCCAGCG TCTACTACGC GCTGCGCCAG GCGCCGCTCG CCGCCGAACC GCGCCTGACC
GCCCTGTTCG CGCTGCGCCG CGAGCTCGAG GAAACCGTCA AGGAAACCAG CGACCCGACC
GTCGGACACA CGAAGCTCGC GTGGTGGCAC AAGGAGCTCG CGGCGCTCGC CGCCGGCGAA
CCGTCGCACC CGGTCACGAA GGCGCTCGCG CAGCACCACC CGGCGATCGC GGCCGAAGCC
GACGCACTGC GCACGCTGGT CAACGGTTAC GGGATGGATC TCGAACAAGC GCGCTACCTG
GATTTCGCGA ACCTGCAACG CTACATCGCG CAGGTCGGCG GCACCTTCGC ATCGCTGGTC
GCGCGCGCCA GCGCCGCGAA TCCGGCCGAC CCGCAGCCGT GGGCCGCGGA CGCCGGCCGC
GCGCTGATGC TCGCGCAATT CGTGCAGGAG CTCGGCAACG ATGCGCGCCA TGGCCGCATC
TATCTGCCGA TCGACGAACT GCAACGCTAC AACGTGACCG CGGCCGACCT GCTGAACCGT
CGCTACAGCC CGGCCTTCAC CGAGCTGCTG CAGTTTCAGA CGGCCCGCGC GCGCGAAGCG
CTCGCCGCCG CCGACGCAGC GATCCCCGCG TCCGAACGCC GCGCGCAACG CACGCTCCGT
GCGCAGATCG CACTGGCCGG CGCGCTGCTC GACGAAATCG AGCGCGACGG CTACCAGGTG
CTGCACCAGC GCATCGCGCT GACGCCGATC CGCAAGCTGT GGATCGCATG GCGCGCCGCG
CGCCGCCGCT GA
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| Protein sequence | MLECRARRAG PAPARAPEPA SATIPPVNFD DYCQQKAAPA GSSVYYALRQ APLAAEPRLT
ALFALRRELE ETVKETSDPT VGHTKLAWWH KELAALAAGE PSHPVTKALA QHHPAIAAEA
DALRTLVNGY GMDLEQARYL DFANLQRYIA QVGGTFASLV ARASAANPAD PQPWAADAGR
ALMLAQFVQE LGNDARHGRI YLPIDELQRY NVTAADLLNR RYSPAFTELL QFQTARAREA
LAAADAAIPA SERRAQRTLR AQIALAGALL DEIERDGYQV LHQRIALTPI RKLWIAWRAA
RRR
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