| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1909 |
|---|
| Symbol | |
|---|
| ID | 4310913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2101313 |
|---|
| End bp | 2103736 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638149725 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_773799 |
|---|
| Protein GI | 115351960 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGCA CCCAACTTCT TCCGCCGGAA CGCATCACGC TCCCGCTGCT GCCGCTGCGG
GACGTCGTCG TTTTCCCGCA CATGGTGATT CCGCTCTTCG TGGGCCGGCC GAAATCGATC
AAGGCCCTCG AAGCAGCGAT GGAAGGCGGC AAGCACATCA TGCTCGTCGC CCAGAAAACC
GCGGCCAAGG ACGAACCGAC CGAAAAGGAC ATGTACGAGG TCGGTTGTAT CGCCAACATC
CTGCAGATGC TGAAGCTGCC GGACGGCACC GTGAAGGTGC TCGTCGAGGG CCTGCAGCGC
GCGAAGGCGT TGTCGATCGA AGAGCAGGAG ACGCAGTTCT CCTGCGACGT GATGCCGCTC
GAGCCCGATC ACGCCGACAG CGCGGAAACG GAAGCGCTGC GCCGCGCGAT CGTGTCGCAG
TTCGACCAGT ACGTGAAGCT GAACAAGAAG ATCCCGCCGG AGATTCTCAC GTCGCTGTCG
GGCATCGATG AAGCCGGTCG CCTCGCGGAC ATGATCGCCG AGCGTCTGCC GCTGAAGCTC
GACCAGAAGC AGCACATCCT CGAGATGTTC CCGGTCATCG AGCGCCTCGA GCACCTGCTC
GCGCAGCTCG AAGCCGAGAT CGACATCCTG CAGGTCGAAA AGCGCATCCG CGGGCGCGTG
AAGCGCCAGA TGGAAAAGAG CCAGCGCGAG TACTACCTGA ACGAACAGGT CAAGGCGATC
CAGAAGGAAC TGGGCGAAGG CGAGGAGGGT GCGGATCTCG AGGAACTCGA GAAGCGCATC
AACGCCGCGC GCATGCCGAA GGAAGCGAAG AAGAAGGCCG ACGCCGAGCT CAAGAAGCTG
AAGCTGATGT CGCCGATGTC GGCGGAAGCG ACCGTCGTGC GCAACTACAT CGACACGCTG
ATCGGCCTGC CGTGGCGCAA GAAGAGCAAG GTCAACAACG ATCTGTCGAA CGCCGAGCAG
GTGCTCGACG AGGATCACTT CGGCCTCGAG AAGGTGAAGG AACGCATTCT CGAGTACCTC
GCGGTGCAAC AGCGCGTGGA CAAGGTCAAG GCGCCGATCC TGTGCCTCGT CGGGCCCCCG
GGCGTCGGCA AGACCTCGCT CGGCCAGTCG ATCGCGCGTG CGACGAACCG CAAGTTCGTC
CGGATGGCGC TCGGCGGCGT GCGTGACGAA GCCGAGATCC GCGGTCACCG CCGGACGTAC
ATCGGCTCGA TGCCGGGCAA GATCCTGCAA AGCCTCGCGA AGGTCGGCGT GCGCAATCCG
CTTTTCCTGC TCGACGAAGT CGACAAGATG GGCATGGATT TCCGCGGCGA TCCGTCGTCG
GCGCTGCTCG AAGTGCTCGA TCCGGAACAG AACCACACGT TCGCCGATCA CTACATCGAA
GTCGACTTCG ACCTGTCGGA CGTGATGTTC GTCGCGACGT CGAACTCGCT GAACATCCCG
CCGCCGCTGC TCGACCGGAT GGAAGTGATC CGTCTGTCGG GCTACACGGA AGACGAGAAG
GTCAGCATCG CGCAGCGTTA CCTGCTGCCG AAGCAGAAGA AGAACAACGG GCTGAAGGAC
GGCGAGGTCG ACGTCACCGA ACAGGCGATC CGCGACATCA TCCGCTACTA CACGCGCGAA
GCCGGTGTGC GTTCGCTCGA GCGGGAAGTG TCGAAGATCT GCCGCAAGGT CGTGAAGATG
CTGCTGCTGA AGAAGGCATC GGGCGCGATC AAGGTCGATG GCGAGAACCT CGATACGTTC
CTCGGCGTGC GCAAGTACGA CTTCGGCCTC GCGGCGAAGG AAAACCAGGT CGGTCAGGTG
ACGGGCCTCG CGTGGACTGA AGTCGGCGGC GATCTGCTGA CGATCGAAGC CGCGGTGATG
CCGGGCAAGG GCAACGTGAT TCGCACGGGT TCGCTCGGCG ACGTGATGAA GGAGTCGGTC
GAGGCTGCGC GTTCGGTCGT GCGCTCGCGT TCGCGGCGTC TGGGCATCAA GGACGAAGCG
TTCGAGAAGC AGGACATCCA CATCCACGTG CCGGAAGGCG CGACGCCGAA GGACGGTCCG
TCGGCGGGCG GTGCGATGAC GACCGCGCTG GTGTCGGTGC TGACGGGCAT TCCCGTGCGT
GCCGATGTCG CGATGACGGG CGAGATCACG CTGCGTGGCG AAGTGCTGCC GATCGGCGGG
CTGAAGGAAA AGCTGCTGGC TGCGCATCGC GGCGGCATCA AGCTCGTGCT GATTCCGGAA
GAGAACGTGA AGGATCTCGC GGACATTCCG GACAACGTGA AGAACGCGAT CGAGATCGTG
CCGGTCCGCT GGATCGACAA GGTGCTCGAG CTCGCGCTCG AACGTACGCC GACCCCGCTG
CCGCCGGAAG AAGAGGCGAA GGCTGCGGCA CCGGTTGGCG ACGCGGCGAA GGATGCCGGC
TCGACGGAAG TCGTCAAGCA CTGA
|
|---|
| Protein sequence | MSGTQLLPPE RITLPLLPLR DVVVFPHMVI PLFVGRPKSI KALEAAMEGG KHIMLVAQKT
AAKDEPTEKD MYEVGCIANI LQMLKLPDGT VKVLVEGLQR AKALSIEEQE TQFSCDVMPL
EPDHADSAET EALRRAIVSQ FDQYVKLNKK IPPEILTSLS GIDEAGRLAD MIAERLPLKL
DQKQHILEMF PVIERLEHLL AQLEAEIDIL QVEKRIRGRV KRQMEKSQRE YYLNEQVKAI
QKELGEGEEG ADLEELEKRI NAARMPKEAK KKADAELKKL KLMSPMSAEA TVVRNYIDTL
IGLPWRKKSK VNNDLSNAEQ VLDEDHFGLE KVKERILEYL AVQQRVDKVK APILCLVGPP
GVGKTSLGQS IARATNRKFV RMALGGVRDE AEIRGHRRTY IGSMPGKILQ SLAKVGVRNP
LFLLDEVDKM GMDFRGDPSS ALLEVLDPEQ NHTFADHYIE VDFDLSDVMF VATSNSLNIP
PPLLDRMEVI RLSGYTEDEK VSIAQRYLLP KQKKNNGLKD GEVDVTEQAI RDIIRYYTRE
AGVRSLEREV SKICRKVVKM LLLKKASGAI KVDGENLDTF LGVRKYDFGL AAKENQVGQV
TGLAWTEVGG DLLTIEAAVM PGKGNVIRTG SLGDVMKESV EAARSVVRSR SRRLGIKDEA
FEKQDIHIHV PEGATPKDGP SAGGAMTTAL VSVLTGIPVR ADVAMTGEIT LRGEVLPIGG
LKEKLLAAHR GGIKLVLIPE ENVKDLADIP DNVKNAIEIV PVRWIDKVLE LALERTPTPL
PPEEEAKAAA PVGDAAKDAG STEVVKH
|
|---|
| |