Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1908 |
Symbol | |
ID | 4310912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2098664 |
End bp | 2100598 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638149722 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_773798 |
Protein GI | 115351959 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.318888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGATT TCTTCCGTAA TCACCAGCGC CTGATGATGG CGCTCCTGCT CCTTATCGTG TTGCCGGGGC TGGGTTTCGT CGGGATCCAA GGTTTCCGCG GCTTCTTCGA CGACAGCGCG AACGTCGCTG CGATCAACGG GCACAAGATC ACGCGGGTCG AATTCGACGG CGCGTTCCGT CAGCAGATCG ACCAGGCGCG CCAGGCGCTC GGTGGGCAGT TCGACATCAA GGCATTCGAC ACGCCGGAAC ATCGCAAGCA GGTCCTCGAC GGCCTGATCC AGCAACGCGT GCTGGCCGAT GAGACGCAAC GCCTGCACCT GACCGCATCC GACAACGCCG TGCGCGACGC GCTGATGAGC GACCCGATGA TCGCGTCGCT GAAGAAACCC GACGGTTCGA TCGACGTCGA GCGCTATGCC CAGCTGCTGT CGTTCCAGGG AATGACGCCC GAGCAGTACC AGGAGCGCGT GCGCTACAGC CTCGCGCTGC AGCAGATTCC GGCCAGCATC GTGGCGAGCG CATTCACGCC GAAGGGCCCG GCGCAACGCC TGTCGGAGCT GGCCGCGCAG CAGCGCGAAG TGCAGGCGCT CGTGCAGAAG ACGAGCGACT ACGCGGCGAA GGTGCAGCCG ACCGACGCGC AGCTCACCGC GTACTATGAC GCGCACAAGC AGAGCTTCGC GACGCCGGAA ACCGCGACGA TCCAGTATCT CGTCTATTCG CCGGCCGCGG CCGCCGCGAG CGCACAGCCG AACGATGCGG ACATCAAGAA GTTCTACGAC GACAACCCGA CGCACTTCCG CTCGGAAGCG CAGGTACGCG TGAGCCACAT CTTCATCGCC GCAGCGAGCG ACGCGAGCGC CGCCGACAAG GCAGCCGCGA AGGCGAAGGC CGAGCAGCTG CTGGCCGACG TGAAGGCGCA TCCGGACCAG TTCGCGCAGA TCGCGCAGAA GAACTCGCAG GATGCACCGT CGGCAGCGAA GGGCGGCGAT CTCGGCTTCA TCACGCGCGG CTCGACCGCG GGTGGCAAGG CGTTCGACGA TGCCGCGTTC GCGCTGAAGC AGGGCGACGT CAGCGGTGTC GTGCAGTCGG ATCTTGGCTT CCACATCCTG AAGGCGACGG AAGTGAAGCC GTCGGTGGTC AAGCCGTTCG CCGACGTGAA GGATCAGATC GCGGTGCAGC TGAAGCAGCA GTATGCAGCG AAGGCGTTCA CGGACAACGC GGAAGGCTTC ACGTCGACCG TGTATGAAAA GGCGAAGACG CTGCAGCCGG CCGCCGACAA GTACAAGCTG ACGATCCAGA CGGCCACGGT CATGCCGACG CCGAATCCGC AGCTGCCGCC GACGAGCCCG CTGAACAATC CGAAGTTCCT CGCTGCCGTG TTCGCGAGCG ACTCGGTGAA GAGCCAGAAC AACACGCAGG CGATCGACGT GGGCAACAAC ACGCTGATCT CGGCGCGCGT GACCGACTAC AAGCCGGCTG CCGTGCCGGC GCTCGACACG ATCAAGGACG CGGTGCGTCA GAAGGTCGTC GCCGAGCAAG CCACGGAACT CGCGAAGAAG GACGGCGCGG CGAAGCTGGC CGAGCTGCAG AAGTCGAAAT CGGCCGATGG CTTCACGCCC GTCCAGAAGG TGTCGCGCAT GCAATCGCAA GGCCTGACGC CGGCCGCGCT GAGCGCCGTC TACAAGGTCG ATGCGAAGAC GCTGCCGGCC TACGTCGGTG TCGATCTCGG TGCGGACGGC TACGCGATCT ATCGCGTGAA CGCGGTGATC CCGGGCACGG CCGTCGATCC GCAGCAACTC GCGGCCGCGC AGCAGCAGAT GGCGCAGGTC GAAGCGCAAA GCGAAGGCGA AGCGTATCTC GCCGCGCTGC GCGACCGCTC GAAGGTGAAG CTGTACGGCA CCACGCCGAG CCAGTCGCAG GACAGCGGCA ACTGA
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Protein sequence | MLDFFRNHQR LMMALLLLIV LPGLGFVGIQ GFRGFFDDSA NVAAINGHKI TRVEFDGAFR QQIDQARQAL GGQFDIKAFD TPEHRKQVLD GLIQQRVLAD ETQRLHLTAS DNAVRDALMS DPMIASLKKP DGSIDVERYA QLLSFQGMTP EQYQERVRYS LALQQIPASI VASAFTPKGP AQRLSELAAQ QREVQALVQK TSDYAAKVQP TDAQLTAYYD AHKQSFATPE TATIQYLVYS PAAAAASAQP NDADIKKFYD DNPTHFRSEA QVRVSHIFIA AASDASAADK AAAKAKAEQL LADVKAHPDQ FAQIAQKNSQ DAPSAAKGGD LGFITRGSTA GGKAFDDAAF ALKQGDVSGV VQSDLGFHIL KATEVKPSVV KPFADVKDQI AVQLKQQYAA KAFTDNAEGF TSTVYEKAKT LQPAADKYKL TIQTATVMPT PNPQLPPTSP LNNPKFLAAV FASDSVKSQN NTQAIDVGNN TLISARVTDY KPAAVPALDT IKDAVRQKVV AEQATELAKK DGAAKLAELQ KSKSADGFTP VQKVSRMQSQ GLTPAALSAV YKVDAKTLPA YVGVDLGADG YAIYRVNAVI PGTAVDPQQL AAAQQQMAQV EAQSEGEAYL AALRDRSKVK LYGTTPSQSQ DSGN
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