| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1904 |
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| Symbol | |
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| ID | 4310908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2093842 |
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| End bp | 2095386 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638149718 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_773794 |
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| Protein GI | 115351955 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACA CCCGCCCGCT TCCCGACTCC GCCCCGCTCG CGCTGCTGCG CGTCGCCGAC
CTGCGCGCGG CCGAGGCCGC CGCAACCGCC GAACTGCCGC CGCACACGCT GATGGGCCGC
GCGGGCACGG CCGCCGCGCG CTGGCTGTCC GAACGGGTCG CTGGCAACGA ACGCCCGGTC
TGGTTCGCGG TCGGCCCCGG CAACAACGGT GGCGACGCGC TGGTGGCCGC CGCGCAGCTG
CAGCAGCTTG GCGTCGCCAC GCAGGCGTGG ATGCCGCTGG CGGTCAAGCC GGACGATGCG
CAATGGGCGC TCGGCCTCGC GCGCGCGGCC GGCGTGCCGC TGTCGACCGA ACCACCCGCG
TCGCTGGACG ATTACGCGTG GGTCGTCGAC GGATTGTTCG GCATCGGCCT CGGCCGCGCG
CTCGACGGCC CGTTCGCCGC CCAGGCCGCG CGCATCGCCG CGCACACACG AAACGGCGGC
CGCGTGCTCG CGCTCGACGT GCCGAGCGGA CTGGACAGCG ACACAGGCCG GATCGTCGGC
GCGGGCGTCG CCGTCGCCGC GACCCATACG CTCACCTTCA TCGGCGCGAA GCCGGGCCTT
TACACGGGCG ACGGCCGCGA TCTCGCCGGC GAGATTCACA TCGCGTCGCT CGACGTCGCA
CCGCCCGCCA CGCCGGCCGT CGTGCTGAAT GCGCCGGCCC GGTTCGCCGC CGCGCTGCCC
GCCCGCGCGT TCGCATCGCA CAAGGGCACG TTCGGCAGCC TGGCGGTGCT CGGCGGCGAC
ACCGGCATGT GCGGCGCGCC GATCCTCGCC GCGCGCGCCG CGCTGTTCGC GGGGGCCGGC
AAGGTGCATG TCGGCTTCCT CGGCGCCGGC GCGCCGCCGT ACGACCCGCC TTTTCCGGAG
CTGATGCTGC ATCCGGCGGA CGGCCTCGAT CTCGATGCGA TGTCCGCGAT CGCGGCAGGC
TGCGGCCTCG GCCCGCGCGA GGCCGCGGCA ACCCTCGTGC GTGACGTGCT CGCGCACGAC
GCCGTGACGC TGCTCGACGC CGACGCGCTG AACCTCGTCG CGACCCACGC CGAGCTCGCG
ACCGCCGTTG CCGCCCGCGG CGCGCGCGGC CTCGCGTGCG TGCTGACGCC GCATCCGCTC
GAGGCGGCAC GGCTGCTCGG CAGCGATACC GCGACGGTGC AGCAGGATCG GCTGGCCGCG
GCCCAGGCGC TGGCCGCGCG CTACGCGAGC ATCGTCGTGC TGAAGGGCTC GGGCACGGTG
ATTGCCGCGC CCGACGGCCG CCTGACGGTG AACCCGACCG GCAATGCCGC GCTCGCGACC
GGCGGCACCG GCGACGTGCT CGGCGGCCTG ATCGGCGCGC TGCTCGCGCA GCGCGTCGCG
CCGTACGAAG CCGCGCTCGC GGGCGTGTAT CTGCACGGCC TCGCGGCCGA CACATTGACC
GCGAACGGCA ACGGCCCGGC CGGCCTCGTC GCGGGCGAAC TCGCGCCGAT GGTGCGCACG
CTGATCAATC GCCTTTTTTA CCCGTCGCCG CGCGCCGACA TATAA
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| Protein sequence | MTNTRPLPDS APLALLRVAD LRAAEAAATA ELPPHTLMGR AGTAAARWLS ERVAGNERPV
WFAVGPGNNG GDALVAAAQL QQLGVATQAW MPLAVKPDDA QWALGLARAA GVPLSTEPPA
SLDDYAWVVD GLFGIGLGRA LDGPFAAQAA RIAAHTRNGG RVLALDVPSG LDSDTGRIVG
AGVAVAATHT LTFIGAKPGL YTGDGRDLAG EIHIASLDVA PPATPAVVLN APARFAAALP
ARAFASHKGT FGSLAVLGGD TGMCGAPILA ARAALFAGAG KVHVGFLGAG APPYDPPFPE
LMLHPADGLD LDAMSAIAAG CGLGPREAAA TLVRDVLAHD AVTLLDADAL NLVATHAELA
TAVAARGARG LACVLTPHPL EAARLLGSDT ATVQQDRLAA AQALAARYAS IVVLKGSGTV
IAAPDGRLTV NPTGNAALAT GGTGDVLGGL IGALLAQRVA PYEAALAGVY LHGLAADTLT
ANGNGPAGLV AGELAPMVRT LINRLFYPSP RADI
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