Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1894 |
Symbol | |
ID | 4311607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2079414 |
End bp | 2081498 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638149708 |
Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
Protein accession | YP_773784 |
Protein GI | 115351945 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTGG ACTATTCGAC TCGCGACGGC GTGGCCGTCA TCACGCTCAA CAATCCGCCC GTCAACGGGC TCGGCCTGTC GACGCGCCAG GGCGTCATGG ACGCGCTCGA TCGCGCCCTG CAGGATCCGT CGGTCACGGC GATCGTGCTG ACGGGCGCGG GCCGCGCGTT CTCGGGCGGC GCCGACATCA CCGAATTCAA TACCCCGAAG GCCCTGCAGG AGCCGACGCT GCACACCGTG ATTCGCGCGG TGGAGGCGAG CGCGAAGCCG GTCGTCGCGG CGCTGCACAG CGTCGTGATG GGCGGCGGGC TGGAGCTCGC GCTCGGCGCG CACTATCGCG TCGCGGCGCC CGGCGCGCAG GTCGCGCTGC CGGAAGTGAA GCTCGGCCTG CTGCCGGGCG CGGGCGGCAC GCAGCGGCTG CCGCGTGCGG TGGGCCTCGA AACCGCGCTG AACATGATCG TGTCGGGCGC CCCGGTGCCG TCGGAGCAAC TCGCGAACAG CGGGCTGTTC GACGCGATGG CCGACGGCGA CCTGCTCGAC GCGGCCGTCG CGTTCGCGCG CAAGGTCGGT GCGCAGAAGG GGCCGCACCC GCGCGTGCGC GATCGCAAGA TCGTCCACGA GAACGCCGCG GGTTTCATCC AGTTCGCGCG CAATTCGGCG CGGGCCGCCG CGCCGAATTT CCCCGCGCCG CACAAGTGCA TCGACGCGAT CGAAGCCGGC GTGCTGAACG GCTTCGACAA GGGCAGCGTC GCCGAGCGCG AGGGCTTCGT CGCGCTGATG ATGACGCCGG AAAGCCGTGC GCTGCGGCAT GCATTCTTCG GCGAGCGCGC GGCGAGCAAG ATTCCCGACG TGCCGGCCGA TACGCCGGTG CGCGAGATTC GCCGCGTCGG CGTGATCGGC GCGGGCACGA TGGGCGGCGG GATCGCGATG AACTTCATCA ACGCGGGCCT GCCCGTCACG CTGCTCGAGA CGAAGCAGGA CGCACTCGAG CGCGGGCTGG CCACGATCCG CAAGAACTAC GACGCGCAGG TGAAGAAGGG CAAGCTCACG CAGCAGAAGC TCGACGCGCG CATGGCGCTG ATCACGCCGA CGCTGTCCTA TGACGACCTG AAGGACGCGG ACCTGATCGT CGAGGCCGTG TTCGAGGAGC TCGGCGTGAA GGAGCAGGTG TTCGGCCAGC TCGACGCGGT GGCGAAGCCG GGCGCGATCC TCGCGTCGAA CACGTCGACG CTCGACGTCG ACAAGATCGC CGCGTTCACG AAGCGTCCGC AGGACGTGGT CGGCATGCAC TTCTTCAGCC CCGCGAACGT GATGAAGCTG CTCGAGGTCG TGCGCGGCGC GCAGACCGCG AAGGACGTGC TCGCGACCGT GATGGCGGTC GCCAAGAAGA TCCGCAAGAC GGCGGTCGTG TCGGGCGTGT GCGACGGCTT CATCGGCAAC CGGATGATCG AGCAGTACAT CCGCCAGGCG CTCTTCATGC TCGAGGAGGG CGCGCTGCCC GCGCAGGTCG ATCGTGCGAT CGAGAAGTTC GGTTTCGCGA TGGGCCCGTT CCGGATGAGC GATCTTGCCG GCAACGACAT CGGCTGGGCG ATCCGCAAGC GCCGCTACGT CGAGAAGCCC GATCTGCAGT ATTCGAAGAT CGCCGACCGC CTGTGCGAAC TGGGCCGCTT CGGCCAGAAG ACGGGCGGCG GCTGGTACGA CTACGTGCCG GGCGATCGCA AGGCGAAGCC GTCGGCACTC GTCGACGAAA TGGTCGTCGC GTATTCGAAG GAGCGCGGCG TCGAGCGGCG CAAGATTGGC GACGACGAGA TCGTCGAGCG GCTCGTGTTC GCGCTCGTCA ACGAAGGCGC GAAGATTCTC GAGGAGAAGA TCGCGTCGAA GGCGTCCGAC ATCGACATGG TCTACCTGAC CGGCTACGGC TTCCCGCTCT GGCGCGGCGG CCCGATGCTG TACGCGGACA TGGTCGGCCT CTACAACGTC GAGCGGGCGA TTCGCCGCTA CGCGGCCGCG CCGAACGGCG ACGCGTGGCA GCTCGCGCCG TCGATCGTCG AGCGGGCGGC GGCCGGACGC GGATTCAACG ACTGA
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Protein sequence | MAVDYSTRDG VAVITLNNPP VNGLGLSTRQ GVMDALDRAL QDPSVTAIVL TGAGRAFSGG ADITEFNTPK ALQEPTLHTV IRAVEASAKP VVAALHSVVM GGGLELALGA HYRVAAPGAQ VALPEVKLGL LPGAGGTQRL PRAVGLETAL NMIVSGAPVP SEQLANSGLF DAMADGDLLD AAVAFARKVG AQKGPHPRVR DRKIVHENAA GFIQFARNSA RAAAPNFPAP HKCIDAIEAG VLNGFDKGSV AEREGFVALM MTPESRALRH AFFGERAASK IPDVPADTPV REIRRVGVIG AGTMGGGIAM NFINAGLPVT LLETKQDALE RGLATIRKNY DAQVKKGKLT QQKLDARMAL ITPTLSYDDL KDADLIVEAV FEELGVKEQV FGQLDAVAKP GAILASNTST LDVDKIAAFT KRPQDVVGMH FFSPANVMKL LEVVRGAQTA KDVLATVMAV AKKIRKTAVV SGVCDGFIGN RMIEQYIRQA LFMLEEGALP AQVDRAIEKF GFAMGPFRMS DLAGNDIGWA IRKRRYVEKP DLQYSKIADR LCELGRFGQK TGGGWYDYVP GDRKAKPSAL VDEMVVAYSK ERGVERRKIG DDEIVERLVF ALVNEGAKIL EEKIASKASD IDMVYLTGYG FPLWRGGPML YADMVGLYNV ERAIRRYAAA PNGDAWQLAP SIVERAAAGR GFND
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