Gene Bamb_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1804 
Symbol 
ID4309851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1993765 
End bp1994829 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content72% 
IMG OID638149618 
ProductNLP/P60 protein 
Protein accessionYP_773694 
Protein GI115351855 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGAA TCTGGGTTCC CGTCGCCGTC GTTTCACTGC TCGCGGCCTG CTCCAGCGTG 
CCGCCGCAGT CGGCATCGCG CACCTCCGGC ATGAAGATCA CGACCCCGCG CGCGTTCCCG
CCGCCCGCCA ATTTCCCGAA ATTCGTCGAT CACAGCGTCG GCCAGGAAGA AATCTCGATC
CAGGCGATGA GCCTCGTCGG CGTGCCGTAT CGCTGGGGCG GCAACACGCC CACGAGCGGC
TTCGACTGCA GCGGGCTCGT GCGCTACGTG ATCGGCCGCG CGGCCGACGT GAACCTGCCG
CGCACGACCG CCGACATGAG CAGCCGCGGC GTGTCGATCG ACCCCGAAGA GGTAGCGCCG
GGCGACCTGA TCTTCTTCAA TACGACCGGA CGCCCGCACT CGCACGTCGG CATCTATGTC
GGCAAGCTGC GCTTCGTCAA TGCGCCGTCG ACCGGCGGCA CCGTGCGGCT CGATTATTTG
ACGAACCCGT ACTGGGCCAA GCGCTTCGAC GGCATTCGCC GTGTCGCGCC GCCGCGCGGC
ACACCGGCAC CGTTCGATAC GCCGACCTAC GAGGCCCGGC GCGACGCGCC GCCGGCCGCA
CCAGCCGCTG TCGTGACCGC CGCCGCGCCA CGGCAGCCCG CCTATGCCGC TGCGCAAGCC
AGCGCGGCCC CAGCTCCCGC TCCGGTCGCG CCAGCCCCGG CGGTCGTATC GACCGCTGCG
GTGGCGCCGG CAGCCGCGCC TGCCGCCGAT CCGTACGAAC CGCCGCCGTC GCGCATGCAG
GCCGCCCGGC AGCAGGCAAG CTCCACGAAC GGCGACATGA TCGCCCCGAC CGCGAATGCA
GCGCCTGCCG GCCCGGCAGA GGTCGGCACG CAGATTCCGA CGACGGCGCT GACCGCCGCC
CAGGCGGCCG CGTTCGACGA CGAACCGCCG CCCGCCGCCG CGCCGTCGCC GCGCGCCATC
GAGCCCGCGC AGGTGTGGCG TGCGTCGACG CAATCCGCGC CCGTCAGCGC GCGCACCGGC
ACCGCGGACG ATCCGATCGC CCGCTTCGCG AACGGCAGTT ACTGA
 
Protein sequence
MLRIWVPVAV VSLLAACSSV PPQSASRTSG MKITTPRAFP PPANFPKFVD HSVGQEEISI 
QAMSLVGVPY RWGGNTPTSG FDCSGLVRYV IGRAADVNLP RTTADMSSRG VSIDPEEVAP
GDLIFFNTTG RPHSHVGIYV GKLRFVNAPS TGGTVRLDYL TNPYWAKRFD GIRRVAPPRG
TPAPFDTPTY EARRDAPPAA PAAVVTAAAP RQPAYAAAQA SAAPAPAPVA PAPAVVSTAA
VAPAAAPAAD PYEPPPSRMQ AARQQASSTN GDMIAPTANA APAGPAEVGT QIPTTALTAA
QAAAFDDEPP PAAAPSPRAI EPAQVWRAST QSAPVSARTG TADDPIARFA NGSY