Gene Bamb_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1748 
Symbol 
ID4309830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp1933465 
End bp1934094 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID638149562 
Producthypothetical protein 
Protein accessionYP_773638 
Protein GI115351799 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.15146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC ACGACGAACA AGAATCGATT GAAAGTGTCA AGGCGTGGTG GGCCCGCTGG 
GGCAACCTCA CCACGTGGAT CGTGCTCGCG GCGCTGGTCG TCGCGGCCGG TTTCAACGGC 
TGGAATTACT GGCAGCGCCG TCAGGCCGCC GAGGCTTCCG GGTTGTACGA GCAGGTCCAG 
AAGGCCGCCG CCGCGAACGA CAAGGCGACG ATGGCCCGCG CGGCCGCCGA CATGGAAGAC 
AAGTTCGCCC GCACGCCGTA TGCGCAGATG ACGGCCCTGT CGGCCGCGAA GACGCTCTAC 
GCGGCAGGCG ACGCCGCTGG CGCGAAAGCC CAGTTGCAGT GGGCTGTCGA TCACGCCAGG 
GATGACGAGT ACAAGCAGAT CGCGAAGCTG CGTCTCGCGT CGCTGCTGCT CGACGAGAAG 
GCGTACGATG CGGGCCTCGC GCTGCTGTCC GGCACGCCGG TCGATGCATT CAAGGGCGTC 
GTGGCGGATC GCCGCGGCGA TCTGCTGGCC GCGCAAGGCA AGACCGACGA CGCGCGCGCT 
GCGTACAAGC TCGCGCTCGA CGGCCTGTCG AAGGACGACC AGTCCGCGCG CCAGCTCGTG 
CAGTTCAAGC TCGACGCGCT CGGCGGCTGA
 
Protein sequence
MSYHDEQESI ESVKAWWARW GNLTTWIVLA ALVVAAGFNG WNYWQRRQAA EASGLYEQVQ 
KAAAANDKAT MARAAADMED KFARTPYAQM TALSAAKTLY AAGDAAGAKA QLQWAVDHAR 
DDEYKQIAKL RLASLLLDEK AYDAGLALLS GTPVDAFKGV VADRRGDLLA AQGKTDDARA 
AYKLALDGLS KDDQSARQLV QFKLDALGG