Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1668 |
Symbol | |
ID | 4310989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1843034 |
End bp | 1844431 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638149483 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_773559 |
Protein GI | 115351720 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.126097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGC ACGACACCAT TCCGATCGTT CCCGCGCCGT CGCGCACCGT CATGCCCGAC GTGCGCGCGC TCGTCGCATA TCTGGAACAG GATCCTCAGC CGATGATCGT CCTCGATCCC GACTACCGCA TCCTCGCGGC GAACGATGCG TACCGGCGCC AGTTCGGCGT GGCGGGCGTC GAGCACGTCG GGCGGCACTG CTTCCAGGTG TCGCATCACT ACGACGTGCC GTGCGACCAG GCCGGCGAGC ATTGCCCGAT GAAGCAGGCG CTCGAGTCGC GCAGCCTGAA CCGCGTGCTG CACATTCACC ATACGCCGCG CGGCCCCGAG CACGTCGACG TGGAATTGCG GCCGATCTTC GACGCGCGCG GCGACGTGAT CGCGTACGTC GAGCGGCTGA CGACGGTGCG CAGCGCGTCC GCGCAGCCCA GCGCGGAAGG GCTCGTCGGC GGCGCCGACG CATTCAATGC GGCGCTCGGC GCGCTGCAGC GCGTCGCACC GTCGATGCTG CCCGTGCTGC TGCTCGGTGA ATCGGGTACC GGCAAGGAAT TGTTCGCGCG GGCGCTGCAC GAGGCGAGCG CGCGCGCGAT GGGGCCGTTC GTGGTCGTCG ATTGTTCGGG CATCGCCGAG ACGCTGTTCG AGAGCGAACT GTTCGGCTAC GAGAAGGGCG CGTTTACCGG CGCGAACCAG CGCAAGCCGG GCCTCGTCGA GACCGCGCAG GGCGGCACGC TGTTTCTCGA TGAAATCGGC GACGTGCCGC TGCCGATGCA GGTGAAACTG CTACGGCTGA TCGAGTCGGG GACGTTCCGG CGCGTCGGTG GCGTCGAGGC GCTGCGCGCG GATTTCCGGC TCGTCGCGGC TACGCACAAG CCGCTGCGCG AGATGATCGA CGACGGCCGG TTCCGGCAGG ACCTGTACTA CCGGATCAAC GCGTTTCCGA TTCCGCTGCC GGCGCTGCGC GAACGGCAGG GCGACGTCGC GCTGCTGGCC GAATCGATCC TGCGGCGCAT CGCGAACGCG CGCGGCAACG CGGGCGACGC GAGTGCGCGG CCGTTCGCGG CCCGGCCATT TGTGCTGACC GAGCGCGCCC GCGCGTGCCT CGATGCGTAT GCATGGCCCG GCAACATCCG CGAGCTGCGC AACGTGCTCG AACGCGCGTG CCTGTTCGCG GACGACGGCA CGATCCGGGT CGAGCACCTG CCGGCCGAAC TCGTCGCGGC GGCAGCGGCG CCGCAGGAGC GTGACGCGGA CGCGCGCGGC CTGTCGGACG CGGAGCTCGT GCGCATCGCG CGCACGTTCG ACGGCACGCG CAAGGCGCTG GCCGAGCACG TCGGGATGAG CGAACGGACG CTGTACCGGC GGATGAAGGC GCTCGGCCTC GGCTCGCGCG AGCGCTGA
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Protein sequence | MNPHDTIPIV PAPSRTVMPD VRALVAYLEQ DPQPMIVLDP DYRILAANDA YRRQFGVAGV EHVGRHCFQV SHHYDVPCDQ AGEHCPMKQA LESRSLNRVL HIHHTPRGPE HVDVELRPIF DARGDVIAYV ERLTTVRSAS AQPSAEGLVG GADAFNAALG ALQRVAPSML PVLLLGESGT GKELFARALH EASARAMGPF VVVDCSGIAE TLFESELFGY EKGAFTGANQ RKPGLVETAQ GGTLFLDEIG DVPLPMQVKL LRLIESGTFR RVGGVEALRA DFRLVAATHK PLREMIDDGR FRQDLYYRIN AFPIPLPALR ERQGDVALLA ESILRRIANA RGNAGDASAR PFAARPFVLT ERARACLDAY AWPGNIRELR NVLERACLFA DDGTIRVEHL PAELVAAAAA PQERDADARG LSDAELVRIA RTFDGTRKAL AEHVGMSERT LYRRMKALGL GSRER
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