Gene Bamb_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1658 
Symbol 
ID4310979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1831069 
End bp1832850 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content68% 
IMG OID638149473 
Productputative voltage-gated ClC-type chloride channel ClcB 
Protein accessionYP_773549 
Protein GI115351710 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGCG TCGTTTTCCT TCGTCCCCTT CATCAATCTC TTTCAGCCGT GCTCTCGTTC 
CTGCTGAAGC TGCGCACTCG CGCCCAGACG CTGTTCCGCC TGTCGGACGC CCATACGATG
CTGATCTGGT CGGCCGTCGT CGGCGTCGGC GGCGCCTTCG CCACCATGAC GTTCCGCGAA
GGCATCGACC TGATGCAGCA CCTGATCTCC GGGCACAGCG GCAGCTTCGT GCAGATGGCG
AGAAGCCTGC CGTGGTACGT GCGCTTCTGG ATGCCGGCCG CGGGCGGCTT CCTGGCCGGC
TGCGTGCTGC TGCTCGCGAC GCGCGGCGAC AGCAAGGCCG CCAAGACCGA CTACATGGAA
GCCGTCGCGC TCGGCGACGG CGTCGTGCCG GTGCGCCAGA GCCTGTGGCG CAGCGTGTCG
TCGCTGCTGA CGATCGGCAG CGGCGGCTCG ATCGGCCGCG AAGGCCCGAT GGTGCAGCTC
GCGGCGCTGG CCGCGTCGCT GGTCGGCCGC TTCGTGCACT TCGACCCGCC GCGCCTGCGC
CTGCTCGTCG CATGCGGCGC GGCGGCCGGT ATCACGTCCG CGTACAACGC GCCGATCGCC
GGCGCGTTCT TCATCTCCGA AATCGTGCTC GGCACGATCG CGATGGAGAG CTTCGGGCCG
ATGGTCGTCG CGTCCGTGGT CGCGAACATC GTGATGCGGG AATTCGCCGG CTACCGGCCG
CCGTACGAGA TGCCGGTGTT CCCGGCCGTG ACGGGCCCCG AGGTGCTGCT GTTCGTCGTG
CTCGGCGCGC TGTGCGGCGT GCTCGCGCCG CAGTTCCTGC ATCTGCTCGA TGCGTCGAAG
AACCAGTTCA AGCGGCTGCC CGTGCCGCTG CCGGTGCGGC TCGCGCTCGG CGGCCTCGTG
GTCGGCGTGA TCTCGGTGTG GATTCCGGAC GTGTGGGGCA ACGGCTACAG CGTCGTGAAC
CAGATCCTGC ATTCGCCGTG GACCTGGCAG GCGCTCGTCG CGGTGCTGGT GTTCAAGGTG
ATCGCGACCG CCGCGACGGC CGGCTCGGGC GCGGTCGGCG GCGTGTTCAC GCCGACGCTG
TTCGTCGGCG CCGTGTTCGG CTCGCTGTTC GGCCTCGCGA TGAACGCGCT GTGGCCCGGC
CACACGTCCG CGTACTTCGC GTATGCGATG GTCGGGATGG GCGCGTTCAT GGCCGGCGCC
ACGCAGGCGC CGCTCATGGC GATCCTGATG ATCTTCGAGA TGACGCTGAG CTACCAGGTC
GTGCTGCCGC TCCTGGTGTC GTGCGTGTTC GCGTATTTCG TCGCGCGCGC GACCGGCACG
ACGTCGATGT ACGAGATCAC GCTGCGCCAC CACCAGGACG CGCAGGAACG GCTGCGGCTG
CGCACCACGC AGATGCGCGA ACTGATCCAG CCCGCGCAGA CGGTCGTGCC GCTCGCCGCG
AGCGTCGCCG ACATGACGCG CGTATTTCTC GAATATCCGG TGAAGTATCT GTACGTGACC
GACGACGCCG GGCGCTTTCG CGGCGCGGTC GCATTGAAGG ACATCACGTC CGACCTGCTC
GACAAGCGCG ACACGACCGA CAAGACGGCC GCGCACTACG CGCACACGCC GTTTCCGCTG
CTCACGCCCG ACATGCCGCT CGCGACCGCG CTCGAACGCT TCATGGCGTT CCAGGGCGAA
CGACTGCCGG TGATCGAAAG CGAAGCCGAG CCGACGCTCG CGGGGGTCGT CTACAAGACG
TCGCTGCTCG ATGCGTACCG GCGGATGACC GGCGAGCGTT GA
 
Protein sequence
MLRVVFLRPL HQSLSAVLSF LLKLRTRAQT LFRLSDAHTM LIWSAVVGVG GAFATMTFRE 
GIDLMQHLIS GHSGSFVQMA RSLPWYVRFW MPAAGGFLAG CVLLLATRGD SKAAKTDYME
AVALGDGVVP VRQSLWRSVS SLLTIGSGGS IGREGPMVQL AALAASLVGR FVHFDPPRLR
LLVACGAAAG ITSAYNAPIA GAFFISEIVL GTIAMESFGP MVVASVVANI VMREFAGYRP
PYEMPVFPAV TGPEVLLFVV LGALCGVLAP QFLHLLDASK NQFKRLPVPL PVRLALGGLV
VGVISVWIPD VWGNGYSVVN QILHSPWTWQ ALVAVLVFKV IATAATAGSG AVGGVFTPTL
FVGAVFGSLF GLAMNALWPG HTSAYFAYAM VGMGAFMAGA TQAPLMAILM IFEMTLSYQV
VLPLLVSCVF AYFVARATGT TSMYEITLRH HQDAQERLRL RTTQMRELIQ PAQTVVPLAA
SVADMTRVFL EYPVKYLYVT DDAGRFRGAV ALKDITSDLL DKRDTTDKTA AHYAHTPFPL
LTPDMPLATA LERFMAFQGE RLPVIESEAE PTLAGVVYKT SLLDAYRRMT GER