Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1635 |
Symbol | |
ID | 4311062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1809295 |
End bp | 1810833 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638149451 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_773527 |
Protein GI | 115351688 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0545873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGGC CGATGCCGGC CGCCGATGGC GGCTTTCGCC CACCGAGCGT CGCGCTGACG ACGTTCGGTC TCGCGCTCGC TGTCTTCATG CAGGTGCTCG ACGGCACCGT CGCGAACGTA TCGCTGCCGA CGATCGCCGG CAATTTCGGC GTGAGCACGA CGCAGAGCGC ATGGGTCGTC ACCACGTTCT CGGTCAGCAT TGCAATCGCG CTGCCGCTGA CCGGCTTTCT CGTCAAGCGC ATCGGGCAGG TCCGGCTGTT CGTGTGGGCC ACGCTCGCCT TCACGTTCGC GTCGCTGCTG TGCGGCCTCG CGCAAAACCT GCCGCAGCTC GTCGCGTTCC GCGCGCTGCA GGGCCTGGTG GCCGGGCCGA TGATCCCCAC CACGCAAGCG TTGATGTTGT CGATCTACCC GCCGCAGCGA CGCGGCTTCG CGCTGTCGAT GATCGCGATG GTCACCGTCG TCGCGCCGAT CGCGGGCCCC GTGTTCGGCG GCTGGATCAC CGAGCATTAC TCGTGGCGCT GGGCGTTCCT GATCAATCTG CCGATCGGCG TGTTCGCCGC GCTCTGCGTC TTCGCGCAGA TGCGTGCGCG CGTCGAAACG ACCGTCGCCG CGCGCGTCGA CTATGTCAGC CTCGCCGCGC TGGTCGTCGG CGTCGGCGCG CTGCAGATCG TGCTCGACAA GGGCAACGAG GCCGACTGGT TCAACTCCAC GTTCATCGTC GTGATGTCGG TGGTCGCCGC ATTCGGCATC GCGCTGTTCC TGATCTGGGA ACTCAACGAA CCGAATCCGA TCGTGAACCT GCGGCTTTTC GCCCATCGCA ACTTCGCGGC AGGCACGCTG ACGCTCGTGC TCGCATACTC GGCGTTCTTC GCGGTCAACG TGATCGTCCC GCAATGGTTG CAGCGCACGC TCGGCTACAC GGCGTTCTGG GCCGGGCTTG CCGTCGCGCC GATGGGCGTG ATTCCGGTGC TGACGACGCC GTTCATGGGC AAGTACGCGC CGCGCTTCAA CATGCGTGTG CTCGTGTGCT GCGCATTCGC GATCCTCGGC GCGTCGTCGT TCCTGCGCGC CGGCTTCGTG CCCGACGTCG ACTTCACGCA CATCGCGCTG ATCCAGTTGC TGCAGGGCCT CGGCCTCGCG CTGTTCATCA TGCCGATCAA CAGCATCCTG CTGTCCGACC TGAAACCCGA CGAGATCGCC GCCGGGTCCG GCCTGTCGAC CTTCCTGCGC ACGCTCGGCG CGAGCTTCGC GGTATCGATC ACGTCGTTCC TGTGGGATCG GCGCGCCGTC CTGCACCACG CGCAACTCAG CGAGCACGTG AGCGCGTTCG ATCCGGCCGT GCGCGCCGAG GTCGCGCGGC TCGGCGGCGG CGACCCGCAA CGGGCCGCCG CGCTACTGGG CAATCTGGTC GACGCGCAGG CCTATCAGAT TTCATTCAAC GACGTTTCAT TCGCGCTCGG CTGCGTCTAT CTCGCCGTAA TGGCGGTGGT ATGGCTCGCC CGCCCGCCGT TCGGCCCCGG TGCCGGCGCG AAACGATGA
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Protein sequence | MSGPMPAADG GFRPPSVALT TFGLALAVFM QVLDGTVANV SLPTIAGNFG VSTTQSAWVV TTFSVSIAIA LPLTGFLVKR IGQVRLFVWA TLAFTFASLL CGLAQNLPQL VAFRALQGLV AGPMIPTTQA LMLSIYPPQR RGFALSMIAM VTVVAPIAGP VFGGWITEHY SWRWAFLINL PIGVFAALCV FAQMRARVET TVAARVDYVS LAALVVGVGA LQIVLDKGNE ADWFNSTFIV VMSVVAAFGI ALFLIWELNE PNPIVNLRLF AHRNFAAGTL TLVLAYSAFF AVNVIVPQWL QRTLGYTAFW AGLAVAPMGV IPVLTTPFMG KYAPRFNMRV LVCCAFAILG ASSFLRAGFV PDVDFTHIAL IQLLQGLGLA LFIMPINSIL LSDLKPDEIA AGSGLSTFLR TLGASFAVSI TSFLWDRRAV LHHAQLSEHV SAFDPAVRAE VARLGGGDPQ RAAALLGNLV DAQAYQISFN DVSFALGCVY LAVMAVVWLA RPPFGPGAGA KR
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