Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1557 |
Symbol | cobN |
ID | 4310217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1723135 |
End bp | 1726947 |
Gene Length | 3813 bp |
Protein Length | 1270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638149373 |
Product | cobaltochelatase subunit CobN |
Protein accession | YP_773449 |
Protein GI | 115351610 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.462367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTGC TGCGCACCAC GCCGGGCGGC TTCGTCGACG ATACGCAGGG CGTCGTCCGG ATCGACCAGC AGCCGGCCGA CATCGTGATC CTGAGTTCGG CCGATACGAC CTTGTCGCTG CTGGCCAGCG TCGTGCCGAA GCTGCCGGCC GGCTTTCCGA GCGTGCGGCT CGCGAACGTC ACGTTCCTGC GGCAGCCCGC GTCGGTCGAT TTCTATGTCG ACGACGTGCT GCGTCATGCG AAGACGGTCG TGATCGATCA TCTCGGCGGC GAAGCGTACT GGCCGTACGG GATCGAACAG GCCGTGTCGC TGGCGTCCAA GCGCCGGCAG CAGCTCGCGA TGTTCTCGGG CGACCTGCAG GAAGACCCGA ACCTCGTCGC GAAGAGCACG GTCGCGCCGG CGCTGTGCCG GCTGTGGTGG CGCTACCTGC GCGACGGCGG GATGCACAAC GCCGAAGCGC TGCTGCGCAG CATCGCATTC CATACGCTCG GCTTCGGCGA CGAACCCGAG CCGCCGCGCC CGCTGCCGGC CGCCGCGCTG TATCACCCGG CGCGCGACCC GGCGAGCGTC GACGACTGGC GCGCGCGCTG GACGCCCGGC GCACCCGTGG TCGCGATCCT GTTCTATCGC GCGCACTGGC AGGCCGCGAA CACGGCCGTG TTCGACGCGC TGGCCGATGC GCTCGTGCGC GAAGGGCTCA ATCCGCTGCC GATCGCGGTC ACGTCGCTGA AGGACGCGGT GAGCCGCGAG GTCATCACGC AGCTCTGCGA CACGCACGGC GTCGCGCTCG TGCTGAACAC CACGGCCTTC GCGGCCGGCG CGATCGATAG CCCCGAGCCC GACATACTCG CCGGCGACGC GCCGGTGCTG CAGGTGATCC TGTCCGGCGG CAACCGCGAC GCGTGGGTGG CCGACAACCA GGGGCTGCAC GCGCGCGACA TCGCGATGCA CATCGCGTTG CCTGAAGTCG ACGGGCGCAT CGTCACGCGC GCGGTGAGCT TCAAGGGGCT CGCGTATCGG TGTCCGCACA CCGAAGTCGA CGTCGTGCGC TACCAGCCGG ACGCCGAACG GATCGCGTTC GTCGCGGCGC TCGCGCGCGG CTGGTGCCGG CTGCGCACGC TCGACAATGC CGACAAGCGC ATCGCGCTGA TTCTCGCGAA CTATCCGCAA AGCGAAGGGC GGATCGGCAA CGGCGTCGGG CTCGACACGC CGGCGTCCGC GCTGCGCGTG CTCGCGGCGC TGCGCGACGC GGGCTATGCG GTAGCCGACC TGCCGGCCGA CGGCGACGCG CTGATCGCGC GGCTCACCGA AGGCGTGACC AACGACCCGG CCGTGCGCGC ACTGCGCCCC GCGTTCCAGA GTTTCGCGCT GGCCGATTAC GTCGCGCATT TCGCGCGGCT GCCGGCCGCC GTGCGCGATG CGCTGAACGA GCGCTGGGGG CCGCCCGACG CGGACCCGAC GCTGCGCCAA GGGCGCTTCC CGATCGCCGG CTGGCGCGCG GGCAACGTGT TCGTCGGCAT CCAGCCGTCG CGTTCGCGCG GCGAGAACGA CTATGCGAGC TACCACGACG CGGACCTCGT GCCGCCGCAC GCTTACCTCG CGTTCTATTT CTGGCTGCGC GATGCGTTCG GCATCGACGC GGTCATCCAC CTCGGCAAGC ACGGCAACCT CGAATGGCTG CCGGGCAAGA GCGTCGCGCT GTCCGACGCG TGCTGGCCGG ACCTGACACT CGGGCCGCTG CCGCATCTGT ATCCGTTCAT CGTCAACGAT CCGGGCGAGG GCAGCCAGGC GAAGCGCCGC GCGCAGGCCG TGATCATCGA TCACCTGATG CCGCCGCTCA CGCGCGCGGA AAACTACGGC CCGCTGCAGG ATCTCGAACG GCAGGTCGAC GAATACTACG AAGCGCTGAT GGTCGATGCG CGGCGCGCGA GGCTGCTGCG CAAGACGATC CTCGCGACGA TCGCCGAACA CCGGCTGCAT GACGAGCTGA GCGTGTCGCC GCCGCGCGAC GCCGGCGACG AGGACGCGCT GCTCACGCGC GTCGACGCCT GGCTGTGCGA ATTGAAGGAA GCACAGATTC GCGACGGGCT GCACGTGTTC GGCGCGTCGC CGCTCGACCG CCAGCGGCGC GATACGCTGC TCGCGCTCGC ACGCTTTCCG GTCGGCGACG GCAAGGGCGA ACGCGCGGGG CTGATCGCCG CGCTCGCGCG CGATCTCGCG CTCGGCGACG ATTTCGATCC GCTCGCGGCC GACTGGGCTG CGCCGTGGAC GGGCCCGCGG CCGGCCGTTC TGCAGGCGCT CGACGCGTCG CCGTGGCGCC ATGCGGGTGA CACGCGCGAG CGGCTCGAGC GGCTCGCGCA GCAGTGGCTC GATGGACTGT GCCGTGCGAA TGTCGGCGGC GATGCCGGCA TCGATGCGAC GCCGCCGGGT GCATGGCCGC ACACGCTCGC CGTGCTCGAA CGCGTGCGCG CGACGCTGCT GCCCGCGCTC GACGCGTGCG GCGGCGAGGA ACTGCGCCAG CTGCTGCGCG GGCTCGACGG CCGCTTCGTG CCGCCGGGGC CGAGCGGCTC GCCGTCGCGC GGCCGTCCCG ACGTGCTGCC GACGGGCCGC AACTTCTATT CGGTCGATAC GCGCGCGGTG CCGACGCAGG CCGCGTGGTC GCTCGGGCTG AAATCCGCGC AGCAGCTGAT CGAACGCCAT CTGCAGGATC ACGGCGACTA TCCGCGCGCG ATCGGGCTGT CGGTCTGGGG CACGGCCACG ATGCGCACCG GCGGCGACGA TATCGCGCAG GCCTTCGCGC TCATCGGCGT GCGGCCGAAA TGGGCGCACG GCAGTCATCG CGTGACCGAC TTCGAGATCC TGCCGATCGA GATCTTCGAC CGGCCGCGCA TCGACGTGAC GCTGCGCGTG TCGGGCTTCT TCCGCGACGC GTTTCCGAAC CTGATGCACC TGTTCGACGC GGCCGTGCAG GCCGTCGCCG CGCTCGACGA GCCCGAGGCG CTGAACCCGA TCCGCGCGCG CATCGAGCGC GAACGCGCGA CCTGGATCGA GCGGGGCGTG GCGCCCGACG AAGCGCGACG CCGCGCCGGC TGGCGCGTGT TCGGCGCGCG GCCGGGCAGC TACGGTGCGG GCCTGCAGGA CATGATCGAC CAGCGCCGCT GGCAGACCGA CGCCGATCTC GCCGCCGCGT ATCGCCAGTG GGGCGGCCAT GCGTACGCGC AGAACAGCGC GGGCGACGCG GCCCCCGACG TGTTCGGCGA GCGGCTCGCG GCGATCGACG TCGTCGTGCA GAACCAGGAC AGCCGCGAAC ACGACATCCT CGACTCGAAC GACTACTACC AGTTCCAGGG CGGGATGACG GCGGCCGTGC GCCACCTGTC CGGCCAGCAG CCGAGCATCT ACCACGGCGA CCATGCGAAC CCGGTCGCGC CGAAGATGCG CACGCTGCGC GAGGAGATCG CGCGCGTGAT CCGCTCACGC GTCGTCAACC CGAAATGGCT CGACGGCGTG AAGCGTCACG GCTACAAGGG CGCGGCCGAA ATGGCCGCGA CCGTCGACTA CCTGTACGGC TATGACGCGA CCGCCCGCGT GCTGTCGGAC CATCAGTACG CGCTCGTCGC CGACGCGTAC CTGTTCGACG ACGACACGCG TGCGTTCCTC GAACGACACA ACCCGAAGGC GCTGCACGGC ATCTGCGAAC GCTTTGTCGA AGCGATGCAG CGCGGGCTGT GGCAGCAGCC GGGCGACTAT CGCGAGCGGA TCGAAGCGGT CTGGCTCGAC AGCGAACAAC TCCAGGAAGG AGGACGGCGA TGA
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Protein sequence | MHLLRTTPGG FVDDTQGVVR IDQQPADIVI LSSADTTLSL LASVVPKLPA GFPSVRLANV TFLRQPASVD FYVDDVLRHA KTVVIDHLGG EAYWPYGIEQ AVSLASKRRQ QLAMFSGDLQ EDPNLVAKST VAPALCRLWW RYLRDGGMHN AEALLRSIAF HTLGFGDEPE PPRPLPAAAL YHPARDPASV DDWRARWTPG APVVAILFYR AHWQAANTAV FDALADALVR EGLNPLPIAV TSLKDAVSRE VITQLCDTHG VALVLNTTAF AAGAIDSPEP DILAGDAPVL QVILSGGNRD AWVADNQGLH ARDIAMHIAL PEVDGRIVTR AVSFKGLAYR CPHTEVDVVR YQPDAERIAF VAALARGWCR LRTLDNADKR IALILANYPQ SEGRIGNGVG LDTPASALRV LAALRDAGYA VADLPADGDA LIARLTEGVT NDPAVRALRP AFQSFALADY VAHFARLPAA VRDALNERWG PPDADPTLRQ GRFPIAGWRA GNVFVGIQPS RSRGENDYAS YHDADLVPPH AYLAFYFWLR DAFGIDAVIH LGKHGNLEWL PGKSVALSDA CWPDLTLGPL PHLYPFIVND PGEGSQAKRR AQAVIIDHLM PPLTRAENYG PLQDLERQVD EYYEALMVDA RRARLLRKTI LATIAEHRLH DELSVSPPRD AGDEDALLTR VDAWLCELKE AQIRDGLHVF GASPLDRQRR DTLLALARFP VGDGKGERAG LIAALARDLA LGDDFDPLAA DWAAPWTGPR PAVLQALDAS PWRHAGDTRE RLERLAQQWL DGLCRANVGG DAGIDATPPG AWPHTLAVLE RVRATLLPAL DACGGEELRQ LLRGLDGRFV PPGPSGSPSR GRPDVLPTGR NFYSVDTRAV PTQAAWSLGL KSAQQLIERH LQDHGDYPRA IGLSVWGTAT MRTGGDDIAQ AFALIGVRPK WAHGSHRVTD FEILPIEIFD RPRIDVTLRV SGFFRDAFPN LMHLFDAAVQ AVAALDEPEA LNPIRARIER ERATWIERGV APDEARRRAG WRVFGARPGS YGAGLQDMID QRRWQTDADL AAAYRQWGGH AYAQNSAGDA APDVFGERLA AIDVVVQNQD SREHDILDSN DYYQFQGGMT AAVRHLSGQQ PSIYHGDHAN PVAPKMRTLR EEIARVIRSR VVNPKWLDGV KRHGYKGAAE MAATVDYLYG YDATARVLSD HQYALVADAY LFDDDTRAFL ERHNPKALHG ICERFVEAMQ RGLWQQPGDY RERIEAVWLD SEQLQEGGRR
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