Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1541 |
Symbol | |
ID | 4311801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1707212 |
End bp | 1709464 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638149357 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_773433 |
Protein GI | 115351594 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0957373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGTGGG CAACAGGCAC GCGTTTGCGT GCGATCGCGG CCGCGGCGAG CGTGACGTTC GGGATGGCGG CAGGGCACGC ATTCGCGCAG ACGGCGCCGG CCGTGAACGC AGGCGCCGCG ACGTCGACTG ACAGTGCGCG CAACGGTGCG GCGGCGAGTG CGGGGGCCAG TGCGCCGAAT GGCCCGGCGA CCGGCACGCT GCCGGCGATC AACGTCAACG CGGGCTCGGA AGGCGACGGC ACGGTCGGTC TCGTCGCGAA GCGCAGCCGG ACCGGCACCA AGACCGATAC GTCGATCAAT GAAATTCCGC AGACGATCAA CGTCGTCACC GCGCAGCAGA TCGAGATGAC CGGCGCGACC GACGTGAACG CGGCGCTGCG CTACGTGCCG GGCTTCTCGT CGTACGGCTC GGACAACCGT TCCGACTGGT ACGCGGCGCT GCGCGGCTTC ACGCCGACGG CCTACGTGAA CGGCCTGCAG GTGCCGAATA CACTGAACCT GTCGAGCTGG CGCGTCGATC CGTACATGAT CGACAGCATC ACCGTGCTGC GCGGGCCGAC GTCGGTGCTG TACGGCGCGG GCGACCCCGG CGCGATCATC GACGTGCAGA CCAAGACGGC CGACGGCGAG CGCGTGCGCG AAGCCGGCGT GCAGTTCGGC AACTATGCGC GCAAGCAGTT CATGATCGAC GTCGGTGACA AGCTCGACGC GGACGGCAAG TATGCGTACC GGTTCGTCGG CGTCGCGCGC GACGGCAACG CGCTGACCGG CCCGAACAAC GACCAGCGCG TCGCGCTCGC ACCGACGTTC CGCTGGCGCC CCGACGCCGA TACGTCGCTG ACGCTGTCGG CCACGTACCT GCAGGACTGG GGCGACATCT CGTCGAACTT CCTGCCGGCG CAAGGCACGG TGCTGCCGAA CCCGAACGGG CAGCTCGACA AGGACGTCTA CGGCGGCGAC CCGAATTTCA ACTACTACCG CAAGAAGCAG TGGTCGCTCG GCTATCAGTT CGAGCGGAAC CTGAACTCGA TGTGGACGTT CCGGCAGAAC GTGCGCTGGA TGCACCTGTC GCTCGACAAC GGTTCGGTGT TCGGCGCGGG CTTCGCGGAC GGCAGCCTGA CCGACATCAA CCGCTGGGCC GGCGTGTTCC AGACGAACTA CAGCCGCTTC GACATCGACA ACAACCTGCA GGGCCGCTTC GGCACCGGGC CGCTCGAGCA CACGCTGCTG CTCGGCTTCC AGTACAACCG GCAGACCGCG ACCGACAGCG AATGGCTGGC CGCCGCGCCG ACGCTGAACA TCTACAACCC GGTCTACACG CCGGTCACGC TGTCCGTGTT TTCGCCGCCG AACACCACGT ACCGTACCAA CACGTACACG ACGATGAACA CGTTCGGGCT GTACGTGCAG GACCAGATCA AGTGGAACCG CTGGACGCTG ACGCTCGGCG GCCGCGAGGA CTGGGTCAAC CAGCGGCTGG ACGACCGCGC GGGCGGCACG CAGTCGAAGG CCGACATCAC GGCGTTCACC GGCCGCGTGG GCCTTACGTA CCAGGGCGAC TACGGGCTGT CGCCGTACAT CAGCTACGCG ACGTCGTTCA ACCCGCTGAT CGGCGTGAAC CTGTACGGCG GCGGCCTGCC GCAGCCCACG CGCGGCAAGC AGATCGAGGC CGGCCTGCGC TGGCAGCCGC CGGGCAAGAA CCTGATGCTG AACGCGGCGA TCTACCAGAT CAACCAGACC AACGTGCTCA CGTCGACGCC GCTGAATCTC GACCCGTCCG GTACGACGTC GATCCAGACC GGCGAAGTGC GTTCGCGCGG CATCGAGCTG AGCGCGACCG GCAAGCTCAC GCGGAACCTG TCGCTGATCG CGTCCTACGT GTACCAGGAC GTGAAGAACG TGAAGGCCAA CGACGCGTCG CTGAACAACT GGCCGGTCGA CATTCCGCGG CCGCGCCAGA TGGCGTCGCT GTGGGCTGAC TGGACGTGGC ACACGGGGCC GCTCACGGGC TTCGGCCTGG GCGGCGGCGT GCGTTACCAG AGCGCGGCGG CCGGTGCGGC GGACAACTCG CTGACGGTAT CGAGCTACAC GCTGTTCGAC GCGGGCGTGC ACTACGACAC GCGTAACTGG CGCTTTGCCG TGAACGGGAC GAACCTGTTC AACCGCCACT ACATCAGCGG TTGCCAGTCG ACGAGCGTGT GCATTTTCGG TACCGACCGT ACGGTGATCG CCACCGCGAA ATACAACTGG TGA
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Protein sequence | MEWATGTRLR AIAAAASVTF GMAAGHAFAQ TAPAVNAGAA TSTDSARNGA AASAGASAPN GPATGTLPAI NVNAGSEGDG TVGLVAKRSR TGTKTDTSIN EIPQTINVVT AQQIEMTGAT DVNAALRYVP GFSSYGSDNR SDWYAALRGF TPTAYVNGLQ VPNTLNLSSW RVDPYMIDSI TVLRGPTSVL YGAGDPGAII DVQTKTADGE RVREAGVQFG NYARKQFMID VGDKLDADGK YAYRFVGVAR DGNALTGPNN DQRVALAPTF RWRPDADTSL TLSATYLQDW GDISSNFLPA QGTVLPNPNG QLDKDVYGGD PNFNYYRKKQ WSLGYQFERN LNSMWTFRQN VRWMHLSLDN GSVFGAGFAD GSLTDINRWA GVFQTNYSRF DIDNNLQGRF GTGPLEHTLL LGFQYNRQTA TDSEWLAAAP TLNIYNPVYT PVTLSVFSPP NTTYRTNTYT TMNTFGLYVQ DQIKWNRWTL TLGGREDWVN QRLDDRAGGT QSKADITAFT GRVGLTYQGD YGLSPYISYA TSFNPLIGVN LYGGGLPQPT RGKQIEAGLR WQPPGKNLML NAAIYQINQT NVLTSTPLNL DPSGTTSIQT GEVRSRGIEL SATGKLTRNL SLIASYVYQD VKNVKANDAS LNNWPVDIPR PRQMASLWAD WTWHTGPLTG FGLGGGVRYQ SAAAGAADNS LTVSSYTLFD AGVHYDTRNW RFAVNGTNLF NRHYISGCQS TSVCIFGTDR TVIATAKYNW
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