| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1522 |
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| Symbol | |
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| ID | 4311782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1672876 |
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| End bp | 1674333 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638149338 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_773414 |
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| Protein GI | 115351575 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCAT TGAATGCATG GGCCGCACCG AGGCTTCAGC TCGCGCTGGC CACGGCGCTC
GCGCTCGCGG GCTGCTCGCT CGCGCCGCGT TACGAGCGGC CGGCGGCGCC GGTGCCGGCC
AGCTATGCGA CGGTCGATGG CGACACGCAG CAGGGCGTCG GCCCGGCTTC GACGGCCGAC
GCCGCGCTGC TCGACGACTG GCGCGCGTAT TTCACCGATC CGGCGCTGCA GGCATGGATC
GATGCCGCGC TCGCGAACAA TCGCGACCTG CGGATCGCGG CCGGCCGGCT CGACGAAGCG
CGCGCGCTGT ACGGCGTGCA GCGCGCGGAT CTGATGCCGT CGGTCGACGC GAATCTCGGC
TACGAACGCA CGCGCCAGTA CGATCCGGTC GTGCGCGAGA GCGCGGTGAG CGGGCTGTAT
CGCGCGGGTG TAGGCGTCAG CGCGTACGAG CTCGACCTGT TCGGCCGCGT GCGCAACCTG
TCCGATGCGG CGCTCGCCGA GTATTTCGCG ACGGCCGACG CGCAGCGCAC GGTGCGCATC
GGCGTGATTG CCGAAGTCGC GGGGGCGTAC GTGTCGGAGC GATCGTTGCA CGAACAACTG
GTGCTGGCCC AGCGCACGCT CGACGCGCGC GAGCGCATCG CCGCGCTCAC GCAGCGCCGC
TACGCGGCCG GCACGAGCGA CGCGATCGAA CTGCGTTCGG CCGAGATGCT GGTCGCGTCC
GCGCGCGCAT CGCAGGCCGC GCTGCAGCGC GAGCATGCGC AATCGGTGCG CGCGCTGCAA
TTGCTCGCCG GCGATTTCGC GCGCGGCGTG CCTGCCGACG GCACCGCGCT CGACACGCTC
GCGATTGCGC CGGTGGCGCC CGGCGCGCCG AGCGCGCTGC TCGAGCGGCG GCCGGACATC
CGGCAGGCCG AGTCGCGGCT CAAGGCCGCG AACGCGCAGA TCGGCGCCGC GCGCGCGGCA
TTCTTCCCGC GCGTCGCGCT GACCACCGAC TACGGCTCGG TCAGCGATGC GTTCTCGACC
CTGTTCGCGG CCGGCACGAG CGTGTGGACG TTCGCGCCGC GCATCACGCT GCCGATTTTC
GCGGGCGGTC GCAATCGCGC GAATCTCGAC GTCGCGAGTG CGCGCAAGCA CATCGCGGTG
GCCGAGTACG AGAAGACCGT GCAGACCGCG TTCCGCGAAG TGGCCGACGC ATTCGCCGCG
CGCGACTGGA TCGATCGCCA GCTCGCTGCG CAGCAGGACG TCTACGCGGC CGACGGCGCG
CGGCTGAAAC TCGCGGAGCG CCGCTATGCG GGCGGCGTCG CGACGTATCT CGAACTGCTC
GACGCGCAGC GCAGCACGTA CGAATCCGGG CATGAGCTGA TCCGGCTCAA GGCGCTGCGG
CTCGCGAATG CGATTGCGCT GTATCGCGCG CTCGGCGGCG GCTGGGCGCC GGCCACCGCT
GGCGAAGCCG CCGCGTGA
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| Protein sequence | MFALNAWAAP RLQLALATAL ALAGCSLAPR YERPAAPVPA SYATVDGDTQ QGVGPASTAD
AALLDDWRAY FTDPALQAWI DAALANNRDL RIAAGRLDEA RALYGVQRAD LMPSVDANLG
YERTRQYDPV VRESAVSGLY RAGVGVSAYE LDLFGRVRNL SDAALAEYFA TADAQRTVRI
GVIAEVAGAY VSERSLHEQL VLAQRTLDAR ERIAALTQRR YAAGTSDAIE LRSAEMLVAS
ARASQAALQR EHAQSVRALQ LLAGDFARGV PADGTALDTL AIAPVAPGAP SALLERRPDI
RQAESRLKAA NAQIGAARAA FFPRVALTTD YGSVSDAFST LFAAGTSVWT FAPRITLPIF
AGGRNRANLD VASARKHIAV AEYEKTVQTA FREVADAFAA RDWIDRQLAA QQDVYAADGA
RLKLAERRYA GGVATYLELL DAQRSTYESG HELIRLKALR LANAIALYRA LGGGWAPATA
GEAAA
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