| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1521 |
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| Symbol | |
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| ID | 4311781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1669739 |
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| End bp | 1672876 |
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| Gene Length | 3138 bp |
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| Protein Length | 1045 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149337 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_773413 |
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| Protein GI | 115351574 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGTT TCTTCATCGA TCGCCCCGTC TTCGCGTGGG TGATCGCACT CTTCATCATG
CTCGGCGGCG CGTTCGCGAT TCGCGCGCTG CCCGTCGCGC AATACCCGGA CATCGCGCCG
CCCGTCGTCA GCATCTATGC GACGTATCCG GGCGCGTCCG CGCAGGTCGT CGAGGAATCG
GTGACCGCGC TGATCGAGCG CGAAATGAAC GGCGCGCCGG GGCTGCTGTA TACGTCCGCG
ACGAGCAGCG CCGGGGCCGC GTCGCTGTAC CTGACGTTCA AGCAGGGCGT CAACGCCGAT
CTCGCGGCCG TCGAAGTGCA GAACCGGCTG AAGACGGTCG AGGCGCGGCT GCCCGAACCG
GTGCGGCGCG ACGGCATCCA GGTCGAGAAG GCCGCGGACA ACATCCAGCT CGTCGTGTCG
CTGACGTCGG ATGACGGCCG GATGAGCGCC GTGCAGCTCG GCGAATACGC GTCGGCGAAC
GTCGTGCAGG CGCTGCGCCG CGTCGACGGC GTCGGCAAGG TGCAGTTCTG GGGCGCCGAA
TACGCGATGC GGATCTGGCC CGACCCGGTG AAGCTGGCCG GTCACGGCCT CACCGCGTCG
GACATCGCAT CGGCCGTGCG CGCGCACAAC GCGCGCGTGA CGGTCGGCGA CATCGGCCGC
AGCGCGGTGC CGGACAGTGC GCCGATCGCG GCGACCGTGT TCGCCGATGC GCCGCTGAAG
ACGCCGGCCG ATTTCGGCGC GATCGCGCTG CGCGCGCAGC CGGACGGCTC CGCGCTCCAT
CTGCGCGACG TCGCGCGCAT CGAGTTCGGC GGCAACGACT ACAACTATCC GTCGTACGTG
AACGGCAAGG TCGCGACCGG CATGGGCATC AAGCTCGCGC CGGGCTCGAA CGCGGTGTCC
ACGGAGAAGC GCGTGCGCGC GACGATGGAC GAGCTGTCCG CATATTTCCC GCCGGGCGTG
AAGTACCAGA TCCCGTACGA GACGTCGTCG TTCGTGCGCG TGTCGATGAA CAAGGTCGTC
ACGACGCTGA TCGAGGCCGG CGTGCTGGTG TTCCTCGTGA TGTTCCTGTT CATGCAGAAC
CTGCGCGCGA CGCTGATTCC GACGCTCGTC GTGCCGGTCG CGCTCGCGGG CACGTTCGGC
GTGATGTACG CGGCCGGCTT CTCGATCAAC GTGCTGACGA TGTTCGGGAT GGTGCTCGCG
ATCGGCATCC TCGTCGACGA TGCGATCGTC GTCGTCGAGA ACGTCGAGCG GCTGATGGTC
GAGGAGGGGC TCGCACCCTA CGACGCGACC GTCAAGGCGA TGCGGCAGAT CAGCGGCGCG
ATCGTCGGCA TCACCGTGGT GCTGACGTCG GTGTTCGTGC CGATGGCATT CTTCGGCGGC
GCGGTGGGCA ACATCTACCG GCAGTTCGCG CTGTCGCTCG CGGTGTCGAT CGGCTTCTCG
GCGTTTCTCG CGCTGTCGCT CACGCCCGCG CTGTGCGCGA CGCTGCTCAA GCCGGTGTCC
GGCGACCATC ACGAGAAGCG CGGCTTCTTC GGCTGGTTCA ACGGCTTCGT CGCGCGCTCG
ACGCAGCGTT ATGCGACGCG CGTCGGCGCG ATGCTGAAGA AGCCGCTGCG CTGGCTGGTC
GTATACGGCG CGCTGACCGC GGCCGCGGCG CTGATGCTTA CGCAACTGCC GAGCGCGTTC
CTGCCCGACG AGGACCAGGG CAACTTCATG GTGATGGTGA TCCGGCCGCA GGGCACGCCG
CTCGCGGAAA CGATGCAGAG CGTGCGCGAG GTCGAATCGT ATATTCGCCG CGACGAGCCG
GCCGCGTACA CGTTCGCGCT CGGCGGCTTC AACCTGTACG GCGAAGGGCC GAACGGCGGG
ATGATCTTCG TCACGCTGAA GAACTGGAAG GAACGCAAGG CCGCGCGCGA TCACGTGCAG
GCGATCGTCG CGCGCATCAA CGAGCGCTTC GCGGGCACGG CGAACACCAC GGTGTTCGCG
ATGAACTCGC CGGCGCTGCC CGATCTCGGC TCGACGAGCG GCTTCGACTT CCGGCTGCAG
AACCGCGGCG GGCTCGACTA CGCCGCGTTC AGCGCCGCGC GCGAGCAACT GCTCGCGGCG
GGCGGCAAGG ATCCGGCGCT CACCGACGTG ATGTTCGCCG GCACGCAGGA CGCGCCGCAG
CTGAAGCTCG ACATCGATCG CGCGAAGGCG TCGGCGCTCG GCGTGTCGAT GGACGAGATC
AACACGACGC TCGCGGTGAT GTTCGGCTCC GACTATATCG GCGACTTCAT GCACGGCACG
CAGGTGCGTC GCGTGATCGT GCAGGCCGAC GGGCTGCACC GGCTCGATCC GGCCGACGTG
CAGAAGCTGC GCGTACGCAA CGCGGGCGGC GAGATGGTGC CGCTCGCGGC GTTCGCGACG
CTGCACTGGA CGCTCGGGCC GCCGCAGCTC ACGCGCTACA ACGGCTTTCC GTCGTTCACG
ATCAACGGCT CGGCCGCGCC CGGCCACAGC AGCGGCGAAG CGATGGCCGC GATCGAACGG
CTCGCCGCGA AGCTGCCGGC CGGCATCGGC CACGCGTGGT CGGGGCAGTC GTTCGAGGAG
CGGCTGTCGG GCGCGCAGGC GCCGATGCTG TTCGCGCTGT CGGTGCTCGT CGTGTTCCTC
GCGCTCGCGG CGCTGTACGA GAGCTGGTCG ATCCCGTTCG CGGTGATGCT GGTCGTCCCG
CTCGGCGTGA TCGGCGCGGT GCTCGGCGTC ACGCTGCGCG CGATGCCGAA CGACATCTAT
TTCAAGGTGG GGCTGATCGC GACGATCGGG TTGTCCGCGA AGAACGCGAT CCTGATCGTC
GAGGTCGCGA AGGATCTGGT CGCGCAGCGC ATGTCGCTCG TCGACGCCGC GCTCGAGGCC
GCGCGCCTGC GGCTGCGGCC GATCGTGATG ACGTCGCTCG CGTTCGGCGT CGGCGTGCTG
CCGCTCGCAT TCGCGTCGGG CGCCGCGTCC GGCGCGCAGA TGGCGATCGG CACCGGCGTG
CTCGGCGGCA TGATCACGGC GACGGTGCTC GCGGTGTTCC TCGTCCCGCT GTTTTTCGTG
ATCGTCGGCC GCCTGTTCGA CGTCGGCCCG CGCCGGCGCG GCGGCGCGCA GCCGGCGGCG
ATGGAGGGTT CGCAGTGA
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| Protein sequence | MARFFIDRPV FAWVIALFIM LGGAFAIRAL PVAQYPDIAP PVVSIYATYP GASAQVVEES
VTALIEREMN GAPGLLYTSA TSSAGAASLY LTFKQGVNAD LAAVEVQNRL KTVEARLPEP
VRRDGIQVEK AADNIQLVVS LTSDDGRMSA VQLGEYASAN VVQALRRVDG VGKVQFWGAE
YAMRIWPDPV KLAGHGLTAS DIASAVRAHN ARVTVGDIGR SAVPDSAPIA ATVFADAPLK
TPADFGAIAL RAQPDGSALH LRDVARIEFG GNDYNYPSYV NGKVATGMGI KLAPGSNAVS
TEKRVRATMD ELSAYFPPGV KYQIPYETSS FVRVSMNKVV TTLIEAGVLV FLVMFLFMQN
LRATLIPTLV VPVALAGTFG VMYAAGFSIN VLTMFGMVLA IGILVDDAIV VVENVERLMV
EEGLAPYDAT VKAMRQISGA IVGITVVLTS VFVPMAFFGG AVGNIYRQFA LSLAVSIGFS
AFLALSLTPA LCATLLKPVS GDHHEKRGFF GWFNGFVARS TQRYATRVGA MLKKPLRWLV
VYGALTAAAA LMLTQLPSAF LPDEDQGNFM VMVIRPQGTP LAETMQSVRE VESYIRRDEP
AAYTFALGGF NLYGEGPNGG MIFVTLKNWK ERKAARDHVQ AIVARINERF AGTANTTVFA
MNSPALPDLG STSGFDFRLQ NRGGLDYAAF SAAREQLLAA GGKDPALTDV MFAGTQDAPQ
LKLDIDRAKA SALGVSMDEI NTTLAVMFGS DYIGDFMHGT QVRRVIVQAD GLHRLDPADV
QKLRVRNAGG EMVPLAAFAT LHWTLGPPQL TRYNGFPSFT INGSAAPGHS SGEAMAAIER
LAAKLPAGIG HAWSGQSFEE RLSGAQAPML FALSVLVVFL ALAALYESWS IPFAVMLVVP
LGVIGAVLGV TLRAMPNDIY FKVGLIATIG LSAKNAILIV EVAKDLVAQR MSLVDAALEA
ARLRLRPIVM TSLAFGVGVL PLAFASGAAS GAQMAIGTGV LGGMITATVL AVFLVPLFFV
IVGRLFDVGP RRRGGAQPAA MEGSQ
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