Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1431 |
Symbol | |
ID | 4311531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1582613 |
End bp | 1583125 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638149244 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_773323 |
Protein GI | 115351484 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGACCT CGTCTACGGC ATGTAAGGGC CTGCGTCGCT GGATCGCGGC CGTGGCGCTG TTCGCCACCT GCGCATCCGG CGCCGTGGCC AAGGACTGCT GGACCCGGGC GGGAGAGCGG CATGGCATCG ATCCGCTGCT GCTGGTCGCG ATCGCGAAGG TGGAATCCGC GCTGAATCCG CGCGCGATGA ACTGGAACCG GAACGGCACT TACGACATCG GGCTGATGCA GATCAACAGT TCGCATCTGC CGCGTCTCGT GAAGGTCGGC GTGACGCACA AGCGGCTGAT CAACGAACCC TGCACGTCGA TCGACACCGG CGCGTCGATT CTCGCCGGAT TCATCGACCG GCACGGCTAC ACGTGGAACG CGGTCGGCGC GTACAACGCC GGCTCGTCGG AGAAACGCGT GCCGGCACGC AAGGCTTATG CGACCAAGGT CTGGCGCGAG TACCGCGCAT TGACGAGCGA TCGCGACGCG AGCCTCGCGA TGCTCGACGA ATGGCGGAGG TAG
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Protein sequence | MRTSSTACKG LRRWIAAVAL FATCASGAVA KDCWTRAGER HGIDPLLLVA IAKVESALNP RAMNWNRNGT YDIGLMQINS SHLPRLVKVG VTHKRLINEP CTSIDTGASI LAGFIDRHGY TWNAVGAYNA GSSEKRVPAR KAYATKVWRE YRALTSDRDA SLAMLDEWRR
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