| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1387 |
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| Symbol | |
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| ID | 4309611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1525392 |
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| End bp | 1526888 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149198 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_773279 |
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| Protein GI | 115351440 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCT CCCCGTTGTC CGTGCGCGCC GGGTCGTGCC GCGCCGCCGT CGCCGCCGCG
GTTGCCGCGC TGGCGCTGGC GGGCTGCGCA AACTACATCG GCATCAAGAG CGACAAGCAG
ATCGCGCCCG CATCGCAATT CGACACCACG CAGAGCCTGC CGGCCCAGGG CGGCCAGTGG
CCGGCGCTCG ACTGGGCCAA CCAGTTCGGC GATCCGCAGC TGCCGAAGTT GATCGACGAA
GCGCTCGAGG GCAGCCCGTC GATCGCGCAG GCGCAGGCGC GCATCGCGAA AGCATCGTCG
TACATCGAAT CGTCGCGCTC GAACCTGATG CCGAAGGCCG AAGCTAGCTA CTCGTGGACG
CGCGAGCTGT ATTCGTCGAA CGCACTGTTC CCGCCGCCGT ACGGCGGCCA GTGGTACAGC
GAGAACAATG CGCTCGCGAG CGCGTCGTGG GATCTCGACC TGTGGGGCAA GAATCGCGAG
CGCCTGCACA CGGCCGTGTC GCAGGAAAAG GCCGCGGAAG CCGACATGCA GCAGGCGCGC
ATCACGCTCG CGGCGTCGGT CGCCCGCACC TACAACTCGC TCGCGCAACT CTATGCGCTG
CGCGACATCG CGCAACGCGA GATCACCAAC CGCCAGACGG TCGGCAAGAT CACCGACGGC
CGCGTGTCGG CCGGCCTCGA CACCAACGTC GAACGCCAGA CCGCGCGCGG CAATATCGCG
ACGACCCAGG CGTCGCTGTC CGACCTCGAC GGCCAGATCA CGACCGTGCG CTACCAGCTC
GCCGCGCTGC TCGGCAAGGG TCCGGACCGC GGGCTGCAGA TCGCCGCGCC GGTGCTGAGC
CCGGCGGGCG ACGTCGCGCT GCCCGGCAAC CTGCCGGCCG ACCTCGTGTC GCGCCGCCCC
GACATCGTCG CCGCGCGCTG GCAGGTCGAG GCCGCGATGC ACGACGTGAA GGAAGCGAAG
GCCGAATTCT TCCCGGATGT GAACCTCGCG GCCGGCTTCG GCTTCGATGC GTTCGGCTGG
GGCAAATTCC TGAATTTCGC GAGCCGCCAG GCGCAGTTCG GCCCGGCCAT CCATCTGCCG
ATCTTCGATG CCGGCGCGTT GCGCGCGCAG CTCAAGGGCC GTTATGCGGA CTTCGACCTG
TCGGTCGCGA ACTACAACCA GACGCTGATC AACGCGCTGA ACGACGTCGC GACGCAGGTC
GCGTCGATCC GCGCGGTCGA TCGCCAGATG GACGACGCGC AGCGTGCGCT CGACGCGTCG
ACGCGCGCTT ACGATCTCGC CGTGATCCGC TACAAGGCCG GCCTGTCGCC CCAGCTCCAG
GTGCTGACCG CGGACAGCAA CCGCCTCGCA TCGGAACAGA CGGTGACCAA CCTGAAGATG
CGCCGGCGCG ACATGCAGCT CGCGCTGATC AAGGCGCTCG GCGGCGGGTT CGACGCGACC
GGCACGCGGC TCGCCGCGCC CGACGCCGAC AAGCCGACGA AACAGGCCGC CAACTGA
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| Protein sequence | MKPSPLSVRA GSCRAAVAAA VAALALAGCA NYIGIKSDKQ IAPASQFDTT QSLPAQGGQW
PALDWANQFG DPQLPKLIDE ALEGSPSIAQ AQARIAKASS YIESSRSNLM PKAEASYSWT
RELYSSNALF PPPYGGQWYS ENNALASASW DLDLWGKNRE RLHTAVSQEK AAEADMQQAR
ITLAASVART YNSLAQLYAL RDIAQREITN RQTVGKITDG RVSAGLDTNV ERQTARGNIA
TTQASLSDLD GQITTVRYQL AALLGKGPDR GLQIAAPVLS PAGDVALPGN LPADLVSRRP
DIVAARWQVE AAMHDVKEAK AEFFPDVNLA AGFGFDAFGW GKFLNFASRQ AQFGPAIHLP
IFDAGALRAQ LKGRYADFDL SVANYNQTLI NALNDVATQV ASIRAVDRQM DDAQRALDAS
TRAYDLAVIR YKAGLSPQLQ VLTADSNRLA SEQTVTNLKM RRRDMQLALI KALGGGFDAT
GTRLAAPDAD KPTKQAAN
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