| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1321 |
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| Symbol | valS |
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| ID | 4309030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1449334 |
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| End bp | 1452201 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149130 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_773213 |
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| Protein GI | 115351374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA GCACGCTTGC GAAGAGTTTC GAACCCCACA CCATCGAGTC CCAATGGGGG
CCGGAGTGGG AAAAACGCGG CTATGCCGCC CCGGCCTTCG ACCCGGCGCG CCCCGATTTC
GCGATCCAGC TGCCGCCGCC GAACGTCACC GGTACGCTGC ACATGGGCCA CGCGTTCAAC
CAGACGATCA TGGACGGCCT CGCGCGCTAC CACCGGATGC TCGGCGAGAA CACGCTGTGG
GTGCCCGGCA CCGACCACGC GGGGATCGCG ACCCAGATCG TCGTCGAGCG CCAGCTCGAT
GCGCAAGGCG TGTCGCGCCA TGACCTCGGC CGCGAGAAGT TCGTCGAGCG CGTGTGGGAG
TGGAAGCAGC AGTCCGGCTC GACGATCACC GGCCAGGTGC GCCGCCTCGG CGCGTCGACC
GACTGGTCGC GCGAATATTT CACGATGGAC GACAAGATGT CGGCCGCCGT GCGCGACGTG
TTCGTCACGC TCTTCGAACA GGGCCTGATC TACCGCGGCA AGCGCCTCGT CAACTGGGAT
CCGGTGCTGC TCACCGCGGT GTCGGATCTC GAGGTCGCGA GCGAAGAGGA AAACGGCCAC
CTGTGGCACA TCCGCTACCC GCTCGTCGAC GGTTCGGGCT CGCTGACCGT CGCGACGACG
CGTCCCGAGA CGATGCTCGG CGACGTCGCG CTGATGGTCC ACCCGGAAGA CGAGCGCTAC
GCGCACCTGA TCGGCAAGCT GGTCACGCTG CCGCTGACGG GCCGCGAGAT CCCGGTGATC
GCCGACGACT ACGTCGACCG CGAGTTCGGC ACGGGCGTCG TGAAGGTCAC GCCCGCGCAC
GACTTCAACG ACTACCAGGT CGGCCTGCGC CATAACCTCG CGCCGATCGA GATCCTGACG
CTCGACGCGA AGATCAACGA CAACGGCCCC GAGCAGTATC GCGGCCTCGA CCGCTTCGAC
GCACGCAAGG CGATCGTCGC CGACCTCGAC GCGCAGGGCT TCCTCGACTC CGTGAAGCCG
CACAAGCTGA TGGTGCCGCG CGGCGACCGC ACGGGCGTCG TGATCGAGCC GATGCTGACC
GACCAGTGGT TCGTCGCGAT GACGAAGGCG GCGCCGGAAG GCACGTTCAA CCCGGGCAAG
TCGATCACCG AGACGTCGCT CGACGTCGTG CGCAACGGCC AGATCAAGTT CGTGCCGGAA
AACTGGACGA CCACCTACTA CCAGTGGCTC GAGAACATCC AGGACTGGTG CATCTCGCGC
CAGCTGTGGT GGGGTCACCA GATTCCCGCG TGGTACGGCG AGAACGGCGA GGTGTTCGTC
GCGCGCAACG AGGAAGAAGC GCGCGCGCAG GCCGCCGCGA AGGGCTATGC CGGCGCGCTC
AAGCGCGACG AGGACGTGCT CGACACGTGG TTCTCGTCGG CGCTCGTGCC GTTCTCGTCG
CTCGGCTGGC CGAACGAAAC GCCTGAACTG CAGCACTTCC TGCCGTCGTC GGTGCTCGTC
ACGGGCTTCG ACATCATCTT CTTCTGGGTC GCCCGGATGG TGATGATGAC CACGCACTTC
ACCGGCAAGG TGCCGTTCCA TACCGTGTAC GTGCACGGCC TCGTGCGCGA CGCGGAAGGC
CAGAAGATGT CGAAGAGCAA GGGCAACACG CTCGACCCGA TCGACATCGT CGACGGCATC
GACCTCGAAA CGCTGGTCGC GAAGCGCACG ACGGGCCTGA TGAACCCGAA GCAGGCCGCC
ACCATCGAGA AGAAGACGCG CAAGGAATTC CCGGACGGCA TCGCCGCGTT CGGCACCGAC
GCGCTGCGCT TCACGATGGC GTCGATGGCA ACGCTCGGCC GCAACGTGAA CTTCGACCTC
GCGCGCTGCG AAGGCTATCG CAACTTCTGC AACAAGCTGT GGAACGCGAC GCGCTTCGTG
CTGATGAACT GCGAAGGCCA CGACTGCGGC AACGACAAGC CGGAAGTGTG CGGCGCGGGC
GACTGCGGCC CCGGCGGCTA CCTCGACTTC TCGGCGGCCG ACCGCTGGAT CGTGTCGCTG
CTGCAGCGCA CCGAGGCCGA CATCGCGAAG GGCTTCGCCG ATTACCGCTT CGACAACATC
GCGACCAGCA TCTACAAGTT CGTGTGGGAC GAGTACTGCG ACTGGTACCT CGAACTCGCG
AAGGTGCAGA TCCAGAACGG CACGCCGGAA CAGCAGCGCG CGACGCGCCG CACGCTGCTG
CGCGTGCTCG AGACGGTGCT GCGCCTCGCG CACCCGATCA TCCCGTTCAT CACCGAAGCG
CTCTGGCAGA AGGTCGCGCC GCTCACCGGC CGTTATCCGC AAGGCAAGGC CGAGGGCGAA
GCATCGCTGA TGACGCAGGC GTATCCGGTC GCGAACCTGC AGAAGATCGA CGAGGCGTCC
GAGCAATGGG CGGCCGACCT GAAGGCGATC GTCGACGCGT GCCGCAACCT GCGCGGCGAG
ATGAACCTGT CGCCGGCGAC CAAGGTGCCG CTGCTCGCGG CCGGCGACGC CGAGCGCCTG
CGCTCGTTCG CACCGTACGT GCAGGCCCTC GCCCGCCTGT CGGAAGTCCA GATCCTCGCG
GACGAAGCGA CGCTCGACAA GGAAGCGCAC GGCGCGCCGA TCGCGATCGT GGGCCCGAAC
AAGCTGGTAC TGAAGGTGGA GATCGACGTC GCGGCCGAGC GCGAGCGCCT GTCGAAGGAA
ATCGCGCGCC TGACGGGCGA GATCGCGAAG TGCAACGCGA AGCTCGGCAA CGAGGCATTC
GTCGCGAAAG CGCCGCCGGC CGTGGTCGAA CAGGAACAAA AGCGCGTGGC CGAGTTCGGT
AGTACGCTGG AAAAACTGCG TGCCCAGCTC GATCGGTTGC CTGCGTAA
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| Protein sequence | MSDSTLAKSF EPHTIESQWG PEWEKRGYAA PAFDPARPDF AIQLPPPNVT GTLHMGHAFN
QTIMDGLARY HRMLGENTLW VPGTDHAGIA TQIVVERQLD AQGVSRHDLG REKFVERVWE
WKQQSGSTIT GQVRRLGAST DWSREYFTMD DKMSAAVRDV FVTLFEQGLI YRGKRLVNWD
PVLLTAVSDL EVASEEENGH LWHIRYPLVD GSGSLTVATT RPETMLGDVA LMVHPEDERY
AHLIGKLVTL PLTGREIPVI ADDYVDREFG TGVVKVTPAH DFNDYQVGLR HNLAPIEILT
LDAKINDNGP EQYRGLDRFD ARKAIVADLD AQGFLDSVKP HKLMVPRGDR TGVVIEPMLT
DQWFVAMTKA APEGTFNPGK SITETSLDVV RNGQIKFVPE NWTTTYYQWL ENIQDWCISR
QLWWGHQIPA WYGENGEVFV ARNEEEARAQ AAAKGYAGAL KRDEDVLDTW FSSALVPFSS
LGWPNETPEL QHFLPSSVLV TGFDIIFFWV ARMVMMTTHF TGKVPFHTVY VHGLVRDAEG
QKMSKSKGNT LDPIDIVDGI DLETLVAKRT TGLMNPKQAA TIEKKTRKEF PDGIAAFGTD
ALRFTMASMA TLGRNVNFDL ARCEGYRNFC NKLWNATRFV LMNCEGHDCG NDKPEVCGAG
DCGPGGYLDF SAADRWIVSL LQRTEADIAK GFADYRFDNI ATSIYKFVWD EYCDWYLELA
KVQIQNGTPE QQRATRRTLL RVLETVLRLA HPIIPFITEA LWQKVAPLTG RYPQGKAEGE
ASLMTQAYPV ANLQKIDEAS EQWAADLKAI VDACRNLRGE MNLSPATKVP LLAAGDAERL
RSFAPYVQAL ARLSEVQILA DEATLDKEAH GAPIAIVGPN KLVLKVEIDV AAERERLSKE
IARLTGEIAK CNAKLGNEAF VAKAPPAVVE QEQKRVAEFG STLEKLRAQL DRLPA
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